Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
SHC1P29353 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.39□□□□□ -0.11
SHC1P29353 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.39□□□□□ -0.11
SHC1P29353 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.39□□□□□ -0.11
SHC1P29353 AL844908.2-201ENST00000609461 460 ntBASIC14.39□□□□□ -0.11
SHC1P29353 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.39□□□□□ -0.11
SHC1P29353 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHC1P29353 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC14.39□□□□□ -0.11
SHC1P29353 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.39□□□□□ -0.11
SHC1P29353 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHC1P29353 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.39□□□□□ -0.11
SHC1P29353 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.39□□□□□ -0.11
SHC1P29353 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SHC1P29353 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SHC1P29353 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
SHC1P29353 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
SHC1P29353 AC126755.1-201ENST00000525846 6405 ntBASIC14.39□□□□□ -0.11
SHC1P29353 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHC1P29353 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHC1P29353 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC14.38□□□□□ -0.11
SHC1P29353 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SHC1P29353 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SHC1P29353 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC14.38□□□□□ -0.11
SHC1P29353 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SHC1P29353 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SHC1P29353 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHC1P29353 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC14.38□□□□□ -0.11
SHC1P29353 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.38□□□□□ -0.11
SHC1P29353 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHC1P29353 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
SHC1P29353 AC138035.3-201ENST00000622706 2791 ntBASIC14.38□□□□□ -0.11
SHC1P29353 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SHC1P29353 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHC1P29353 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC14.38□□□□□ -0.11
SHC1P29353 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SHC1P29353 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC14.38□□□□□ -0.11
SHC1P29353 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHC1P29353 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHC1P29353 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SHC1P29353 MIR770-201ENST00000390219 98 ntBASIC14.38□□□□□ -0.11
SHC1P29353 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC14.38□□□□□ -0.11
SHC1P29353 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.38□□□□□ -0.11
SHC1P29353 AC241585.1-201ENST00000433527 519 ntBASIC14.38□□□□□ -0.11
SHC1P29353 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.38□□□□□ -0.11
SHC1P29353 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.38□□□□□ -0.11
SHC1P29353 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.38□□□□□ -0.11
SHC1P29353 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHC1P29353 AC011477.6-201ENST00000604980 1927 ntBASIC14.38□□□□□ -0.11
SHC1P29353 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHC1P29353 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
SHC1P29353 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.38□□□□□ -0.11
SHC1P29353 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHC1P29353 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC14.38□□□□□ -0.11
SHC1P29353 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.38□□□□□ -0.11
SHC1P29353 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SHC1P29353 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC14.38□□□□□ -0.11
SHC1P29353 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHC1P29353 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHC1P29353 GSN-203ENST00000373808 2664 ntTSL 2 BASIC14.38□□□□□ -0.11
SHC1P29353 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHC1P29353 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SHC1P29353 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SHC1P29353 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHC1P29353 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHC1P29353 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHC1P29353 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.37□□□□□ -0.11
SHC1P29353 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHC1P29353 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC14.37□□□□□ -0.11
SHC1P29353 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SHC1P29353 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHC1P29353 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
SHC1P29353 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SHC1P29353 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SHC1P29353 CICP13-201ENST00000422015 2789 ntBASIC14.37□□□□□ -0.11
SHC1P29353 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SHC1P29353 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
SHC1P29353 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC14.37□□□□□ -0.11
SHC1P29353 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHC1P29353 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SHC1P29353 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SHC1P29353 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.37□□□□□ -0.11
SHC1P29353 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SHC1P29353 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHC1P29353 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC14.37□□□□□ -0.11
SHC1P29353 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHC1P29353 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHC1P29353 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SHC1P29353 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC14.37□□□□□ -0.11
SHC1P29353 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.37□□□□□ -0.11
SHC1P29353 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC14.37□□□□□ -0.11
SHC1P29353 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.37□□□□□ -0.11
SHC1P29353 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC14.37□□□□□ -0.11
SHC1P29353 AC010336.2-201ENST00000564226 506 ntBASIC14.37□□□□□ -0.11
SHC1P29353 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC14.37□□□□□ -0.11
SHC1P29353 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC14.37□□□□□ -0.11
SHC1P29353 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC14.37□□□□□ -0.11
SHC1P29353 AL033527.5-202ENST00000641632 1098 ntBASIC14.37□□□□□ -0.11
SHC1P29353 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SHC1P29353 SNX18-202ENST00000343017 3140 ntBASIC14.37□□□□□ -0.11
SHC1P29353 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 118.5 ms