Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RXRBP28702 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC19.93■□□□□ 0.78
RXRBP28702 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RXRBP28702 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RXRBP28702 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC19.93■□□□□ 0.78
RXRBP28702 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RXRBP28702 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RXRBP28702 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RXRBP28702 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RXRBP28702 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.93■□□□□ 0.78
RXRBP28702 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC19.93■□□□□ 0.78
RXRBP28702 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
RXRBP28702 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RXRBP28702 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC19.93■□□□□ 0.78
RXRBP28702 ZNRD1-203ENST00000376782 736 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
RXRBP28702 PLA2G2A-202ENST00000400520 974 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RXRBP28702 DPY19L2P5-201ENST00000456300 331 ntBASIC19.93■□□□□ 0.78
RXRBP28702 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC19.93■□□□□ 0.78
RXRBP28702 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC19.93■□□□□ 0.78
RXRBP28702 PMEL-214ENST00000550447 901 ntTSL 3 BASIC19.93■□□□□ 0.78
RXRBP28702 MT3-203ENST00000565838 421 ntTSL 3 BASIC19.93■□□□□ 0.78
RXRBP28702 SELENOW-202ENST00000593892 550 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
RXRBP28702 NAMA-206ENST00000605377 509 ntTSL 5 BASIC19.93■□□□□ 0.78
RXRBP28702 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
RXRBP28702 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RXRBP28702 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
RXRBP28702 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RXRBP28702 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.93■□□□□ 0.78
RXRBP28702 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.93■□□□□ 0.78
RXRBP28702 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RXRBP28702 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RXRBP28702 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC19.92■□□□□ 0.78
RXRBP28702 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RXRBP28702 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RXRBP28702 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC19.92■□□□□ 0.78
RXRBP28702 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RXRBP28702 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RXRBP28702 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.92■□□□□ 0.78
RXRBP28702 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RXRBP28702 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RXRBP28702 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC19.92■□□□□ 0.78
RXRBP28702 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RXRBP28702 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
RXRBP28702 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RXRBP28702 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC19.92■□□□□ 0.78
RXRBP28702 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.92■□□□□ 0.78
RXRBP28702 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC19.92■□□□□ 0.78
RXRBP28702 PFN2-205ENST00000461868 613 ntTSL 2 BASIC19.92■□□□□ 0.78
RXRBP28702 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC19.92■□□□□ 0.78
RXRBP28702 C5orf63-203ENST00000509733 553 ntTSL 4 BASIC19.92■□□□□ 0.78
RXRBP28702 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC19.92■□□□□ 0.78
RXRBP28702 GDNF-207ENST00000515058 764 ntTSL 5 BASIC19.92■□□□□ 0.78
RXRBP28702 FXYD6-208ENST00000529335 708 ntTSL 3 BASIC19.92■□□□□ 0.78
RXRBP28702 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC19.92■□□□□ 0.78
RXRBP28702 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RXRBP28702 Z98259.2-201ENST00000641583 609 ntBASIC19.92■□□□□ 0.78
RXRBP28702 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RXRBP28702 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RXRBP28702 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RXRBP28702 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
RXRBP28702 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC19.92■□□□□ 0.78
RXRBP28702 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RXRBP28702 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
RXRBP28702 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RXRBP28702 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC19.92■□□□□ 0.78
RXRBP28702 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RXRBP28702 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RXRBP28702 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.91■□□□□ 0.78
RXRBP28702 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RXRBP28702 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RXRBP28702 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RXRBP28702 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC19.91■□□□□ 0.78
RXRBP28702 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RXRBP28702 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
RXRBP28702 AC004408.2-201ENST00000623613 2777 ntBASIC19.91■□□□□ 0.78
RXRBP28702 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RXRBP28702 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RXRBP28702 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RXRBP28702 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RXRBP28702 SURF4-203ENST00000371991 715 ntTSL 3 BASIC19.91■□□□□ 0.78
RXRBP28702 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RXRBP28702 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC19.91■□□□□ 0.78
RXRBP28702 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC19.91■□□□□ 0.78
RXRBP28702 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC19.91■□□□□ 0.78
RXRBP28702 TSPY25P-201ENST00000429463 745 ntBASIC19.91■□□□□ 0.78
RXRBP28702 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC19.91■□□□□ 0.78
RXRBP28702 Z99943.1-201ENST00000451545 718 ntTSL 3 BASIC19.91■□□□□ 0.78
RXRBP28702 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC19.91■□□□□ 0.78
RXRBP28702 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC19.91■□□□□ 0.78
RXRBP28702 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RXRBP28702 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RXRBP28702 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC19.91■□□□□ 0.78
RXRBP28702 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
RXRBP28702 CMC2-224ENST00000630396 481 ntTSL 5 BASIC19.91■□□□□ 0.78
RXRBP28702 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RXRBP28702 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RXRBP28702 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RXRBP28702 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RXRBP28702 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RXRBP28702 EDNRB-204ENST00000626030 1571 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms