Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.45□□□□□ -0.26
CCL1P22362 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.45□□□□□ -0.26
CCL1P22362 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC13.45□□□□□ -0.26
CCL1P22362 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.45□□□□□ -0.26
CCL1P22362 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.45□□□□□ -0.26
CCL1P22362 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CCL1P22362 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
CCL1P22362 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.45□□□□□ -0.26
CCL1P22362 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.45□□□□□ -0.26
CCL1P22362 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CCL1P22362 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 AC232323.1-201ENST00000540724 2099 ntBASIC13.44□□□□□ -0.26
CCL1P22362 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 REXO1L5P-201ENST00000622260 2098 ntBASIC13.44□□□□□ -0.26
CCL1P22362 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.44□□□□□ -0.26
CCL1P22362 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CCL1P22362 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CCL1P22362 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 RPL37AP1-201ENST00000412502 279 ntBASIC13.44□□□□□ -0.26
CCL1P22362 TOMM22P5-201ENST00000416399 439 ntBASIC13.44□□□□□ -0.26
CCL1P22362 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC13.44□□□□□ -0.26
CCL1P22362 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.44□□□□□ -0.26
CCL1P22362 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC13.44□□□□□ -0.26
CCL1P22362 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 AC069262.1-201ENST00000539058 672 ntBASIC13.44□□□□□ -0.26
CCL1P22362 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.44□□□□□ -0.26
CCL1P22362 AP000845.1-201ENST00000581677 2131 ntBASIC13.44□□□□□ -0.26
CCL1P22362 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 TBCB-211ENST00000589996 724 ntTSL 3 BASIC13.44□□□□□ -0.26
CCL1P22362 SERF2-217ENST00000630046 862 ntTSL 5 BASIC13.44□□□□□ -0.26
CCL1P22362 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC13.44□□□□□ -0.26
CCL1P22362 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
CCL1P22362 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.44□□□□□ -0.26
CCL1P22362 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CCL1P22362 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL1P22362 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CCL1P22362 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL1P22362 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCL1P22362 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL1P22362 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CCL1P22362 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL1P22362 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
CCL1P22362 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.43□□□□□ -0.26
CCL1P22362 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.43□□□□□ -0.26
CCL1P22362 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCL1P22362 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.43□□□□□ -0.26
CCL1P22362 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL1P22362 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL1P22362 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CCL1P22362 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL1P22362 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCL1P22362 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.43□□□□□ -0.26
CCL1P22362 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL1P22362 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CCL1P22362 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CCL1P22362 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC13.43□□□□□ -0.26
CCL1P22362 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCL1P22362 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CCL1P22362 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC13.43□□□□□ -0.26
CCL1P22362 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CCL1P22362 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC13.43□□□□□ -0.26
CCL1P22362 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC13.43□□□□□ -0.26
CCL1P22362 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms