Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
CAPN3P20807 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
CAPN3P20807 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN3P20807 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN3P20807 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN3P20807 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN3P20807 BSG-215ENST00000618006 1329 ntTSL 2 BASIC15.12■□□□□ 0.01
CAPN3P20807 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN3P20807 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN3P20807 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN3P20807 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN3P20807 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
CAPN3P20807 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
CAPN3P20807 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN3P20807 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CAPN3P20807 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPN3P20807 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN3P20807 MROH4P-201ENST00000431302 1578 ntBASIC15.11■□□□□ 0.01
CAPN3P20807 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN3P20807 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPN3P20807 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN3P20807 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC15.11■□□□□ 0.01
CAPN3P20807 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPN3P20807 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.11■□□□□ 0.01
CAPN3P20807 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN3P20807 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CAPN3P20807 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN3P20807 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN3P20807 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN3P20807 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN3P20807 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPN3P20807 FAM58CP-201ENST00000435741 640 ntBASIC15.11■□□□□ 0.01
CAPN3P20807 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPN3P20807 AC074386.1-202ENST00000463561 864 ntBASIC15.11■□□□□ 0.01
CAPN3P20807 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.11■□□□□ 0.01
CAPN3P20807 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPN3P20807 AC105233.2-201ENST00000523697 349 ntBASIC15.11■□□□□ 0.01
CAPN3P20807 AF228730.5-201ENST00000530288 346 ntBASIC15.11■□□□□ 0.01
CAPN3P20807 AC069262.1-201ENST00000539058 672 ntBASIC15.11■□□□□ 0.01
CAPN3P20807 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPN3P20807 AL450472.2-201ENST00000603663 1156 ntBASIC15.11■□□□□ 0.01
CAPN3P20807 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPN3P20807 AL513210.1-201ENST00000629608 234 ntBASIC15.11■□□□□ 0.01
CAPN3P20807 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPN3P20807 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPN3P20807 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN3P20807 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPN3P20807 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
CAPN3P20807 AL359258.3-201ENST00000622910 2331 ntBASIC15.11■□□□□ 0.01
CAPN3P20807 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN3P20807 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN3P20807 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN3P20807 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN3P20807 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN3P20807 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN3P20807 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPN3P20807 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC15.11■□□□□ 0.01
CAPN3P20807 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN3P20807 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN3P20807 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN3P20807 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN3P20807 GOLGA6L17P-202ENST00000614358 1398 ntBASIC15.11■□□□□ 0.01
CAPN3P20807 WDR20-202ENST00000322340 3060 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
CAPN3P20807 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN3P20807 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN3P20807 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN3P20807 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN3P20807 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN3P20807 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
CAPN3P20807 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC15.1■□□□□ 0.01
CAPN3P20807 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN3P20807 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN3P20807 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN3P20807 AC005912.2-201ENST00000619492 2400 ntBASIC15.1■□□□□ 0.01
CAPN3P20807 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CAPN3P20807 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN3P20807 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.1■□□□□ 0.01
CAPN3P20807 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN3P20807 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.1■□□□□ 0.01
CAPN3P20807 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.1■□□□□ 0.01
CAPN3P20807 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.1■□□□□ 0.01
CAPN3P20807 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
CAPN3P20807 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.1■□□□□ 0.01
CAPN3P20807 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC15.1■□□□□ 0.01
CAPN3P20807 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
CAPN3P20807 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.1■□□□□ 0.01
CAPN3P20807 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN3P20807 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN3P20807 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.1■□□□□ 0.01
CAPN3P20807 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC15.1■□□□□ 0.01
CAPN3P20807 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CAPN3P20807 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN3P20807 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CAPN3P20807 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
CAPN3P20807 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN3P20807 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN3P20807 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN3P20807 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN3P20807 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
CAPN3P20807 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms