Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CXCL3P19876 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC13.17□□□□□ -0.3
CXCL3P19876 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC13.17□□□□□ -0.3
CXCL3P19876 AC107918.2-201ENST00000530817 355 ntBASIC13.17□□□□□ -0.3
CXCL3P19876 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC13.17□□□□□ -0.3
CXCL3P19876 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.17□□□□□ -0.3
CXCL3P19876 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC13.17□□□□□ -0.3
CXCL3P19876 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC13.17□□□□□ -0.3
CXCL3P19876 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC13.17□□□□□ -0.3
CXCL3P19876 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL3P19876 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL3P19876 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CXCL3P19876 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL3P19876 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.17□□□□□ -0.3
CXCL3P19876 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL3P19876 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CXCL3P19876 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL3P19876 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CXCL3P19876 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
CXCL3P19876 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CXCL3P19876 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.16□□□□□ -0.3
CXCL3P19876 AC087386.2-201ENST00000623212 4637 ntBASIC13.16□□□□□ -0.3
CXCL3P19876 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
CXCL3P19876 SCARB2-227ENST00000640957 3255 ntAPPRIS ALT1 TSL 5 BASIC13.16□□□□□ -0.3
CXCL3P19876 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CXCL3P19876 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 SCD5-202ENST00000319540 3101 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
CXCL3P19876 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
CXCL3P19876 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC13.16□□□□□ -0.3
CXCL3P19876 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 HCG4-201ENST00000418983 998 ntBASIC13.16□□□□□ -0.3
CXCL3P19876 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC13.16□□□□□ -0.3
CXCL3P19876 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC13.16□□□□□ -0.3
CXCL3P19876 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC13.16□□□□□ -0.3
CXCL3P19876 LTBR-211ENST00000543190 785 ntTSL 3 BASIC13.16□□□□□ -0.3
CXCL3P19876 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC13.16□□□□□ -0.3
CXCL3P19876 AC090616.6-201ENST00000582640 721 ntBASIC13.16□□□□□ -0.3
CXCL3P19876 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.16□□□□□ -0.3
CXCL3P19876 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC13.16□□□□□ -0.3
CXCL3P19876 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 AC064862.7-201ENST00000604520 867 ntBASIC13.16□□□□□ -0.3
CXCL3P19876 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC13.16□□□□□ -0.3
CXCL3P19876 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
CXCL3P19876 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.16□□□□□ -0.3
CXCL3P19876 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.16□□□□□ -0.3
CXCL3P19876 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.16□□□□□ -0.3
CXCL3P19876 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.16□□□□□ -0.3
CXCL3P19876 LRRC20-201ENST00000355790 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.16□□□□□ -0.3
CXCL3P19876 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.16□□□□□ -0.3
CXCL3P19876 DNAJB6-201ENST00000262177 2527 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC13.16□□□□□ -0.3
CXCL3P19876 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 ZFP82-201ENST00000392161 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 AC079776.2-201ENST00000641154 1609 ntBASIC13.16□□□□□ -0.3
CXCL3P19876 DNAJC27-201ENST00000264711 4992 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 AC015712.2-202ENST00000560068 3213 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
CXCL3P19876 HOGA1-203ENST00000370647 1999 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.16□□□□□ -0.3
CXCL3P19876 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CXCL3P19876 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.16□□□□□ -0.3
CXCL3P19876 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CXCL3P19876 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CXCL3P19876 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC13.15□□□□□ -0.3
CXCL3P19876 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
CXCL3P19876 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCL3P19876 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.15□□□□□ -0.3
CXCL3P19876 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC13.15□□□□□ -0.3
CXCL3P19876 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CXCL3P19876 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCL3P19876 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
CXCL3P19876 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
CXCL3P19876 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC13.15□□□□□ -0.3
CXCL3P19876 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC13.15□□□□□ -0.3
CXCL3P19876 AC023090.2-201ENST00000625182 2110 ntBASIC13.15□□□□□ -0.3
CXCL3P19876 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCL3P19876 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC13.15□□□□□ -0.3
CXCL3P19876 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.15□□□□□ -0.3
CXCL3P19876 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.15□□□□□ -0.3
CXCL3P19876 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC13.15□□□□□ -0.3
CXCL3P19876 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
CXCL3P19876 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
CXCL3P19876 FUOM-202ENST00000368551 628 ntTSL 3 BASIC13.15□□□□□ -0.3
CXCL3P19876 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms