Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.66□□□□□ -0.22
CCL2P13500 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.66□□□□□ -0.22
CCL2P13500 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.66□□□□□ -0.22
CCL2P13500 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.66□□□□□ -0.22
CCL2P13500 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL2P13500 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL2P13500 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC13.66□□□□□ -0.22
CCL2P13500 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL2P13500 AL355493.2-201ENST00000568270 1395 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL2P13500 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL2P13500 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
CCL2P13500 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL2P13500 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL2P13500 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL2P13500 BTBD7P1-201ENST00000447253 1453 ntBASIC13.66□□□□□ -0.22
CCL2P13500 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL2P13500 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CCL2P13500 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL2P13500 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL2P13500 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL2P13500 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL2P13500 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.66□□□□□ -0.22
CCL2P13500 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC13.66□□□□□ -0.22
CCL2P13500 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
CCL2P13500 DBET-201ENST00000630918 3363 ntBASIC13.66□□□□□ -0.22
CCL2P13500 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
CCL2P13500 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
CCL2P13500 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC13.65□□□□□ -0.22
CCL2P13500 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.65□□□□□ -0.22
CCL2P13500 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC13.65□□□□□ -0.22
CCL2P13500 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC13.65□□□□□ -0.22
CCL2P13500 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC13.65□□□□□ -0.22
CCL2P13500 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 SSR4P1-203ENST00000599569 2260 ntBASIC13.65□□□□□ -0.22
CCL2P13500 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.65□□□□□ -0.22
CCL2P13500 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
CCL2P13500 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CCL2P13500 AL161772.1-201ENST00000610494 4412 ntBASIC13.65□□□□□ -0.22
CCL2P13500 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CCL2P13500 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC13.65□□□□□ -0.22
CCL2P13500 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.65□□□□□ -0.22
CCL2P13500 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
CCL2P13500 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CCL2P13500 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC13.65□□□□□ -0.22
CCL2P13500 MIR661-201ENST00000384842 89 ntBASIC13.65□□□□□ -0.22
CCL2P13500 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 RPL13P2-201ENST00000440687 659 ntBASIC13.65□□□□□ -0.22
CCL2P13500 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 C4orf3-202ENST00000504110 667 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 SERBP1P5-201ENST00000510079 1181 ntBASIC13.65□□□□□ -0.22
CCL2P13500 SLED1-202ENST00000512051 380 ntBASIC13.65□□□□□ -0.22
CCL2P13500 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.65□□□□□ -0.22
CCL2P13500 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.65□□□□□ -0.22
CCL2P13500 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
CCL2P13500 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CCL2P13500 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC13.65□□□□□ -0.22
CCL2P13500 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC13.65□□□□□ -0.22
CCL2P13500 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.65□□□□□ -0.22
CCL2P13500 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.65□□□□□ -0.22
CCL2P13500 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.65□□□□□ -0.22
CCL2P13500 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
CCL2P13500 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.65□□□□□ -0.22
CCL2P13500 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC13.65□□□□□ -0.22
CCL2P13500 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 WSCD1-208ENST00000573634 1573 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 AC087481.3-201ENST00000602886 1894 ntBASIC13.65□□□□□ -0.22
CCL2P13500 SEMA4F-201ENST00000339773 2177 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
CCL2P13500 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
CCL2P13500 AC144831.1-201ENST00000573312 2656 ntBASIC13.65□□□□□ -0.22
CCL2P13500 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
CCL2P13500 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.23
CCL2P13500 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC13.65□□□□□ -0.23
CCL2P13500 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL2P13500 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.64□□□□□ -0.23
CCL2P13500 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL2P13500 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL2P13500 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL2P13500 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.64□□□□□ -0.23
CCL2P13500 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
CCL2P13500 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms