Protein–RNA interactions for Protein: P0DN86

CGB3, Choriogonadotropin subunit beta 3, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB3P0DN86 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CGB3P0DN86 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CGB3P0DN86 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
CGB3P0DN86 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CGB3P0DN86 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
CGB3P0DN86 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
CGB3P0DN86 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CGB3P0DN86 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC12.81□□□□□ -0.36
CGB3P0DN86 TNRC18P2-201ENST00000417666 2714 ntBASIC12.81□□□□□ -0.36
CGB3P0DN86 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CGB3P0DN86 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.81□□□□□ -0.36
CGB3P0DN86 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
CGB3P0DN86 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC12.81□□□□□ -0.36
CGB3P0DN86 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
CGB3P0DN86 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CGB3P0DN86 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CGB3P0DN86 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CGB3P0DN86 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
CGB3P0DN86 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.8□□□□□ -0.36
CGB3P0DN86 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CGB3P0DN86 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CGB3P0DN86 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC12.8□□□□□ -0.36
CGB3P0DN86 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CGB3P0DN86 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CGB3P0DN86 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
CGB3P0DN86 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CGB3P0DN86 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC12.8□□□□□ -0.36
CGB3P0DN86 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CGB3P0DN86 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CGB3P0DN86 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CGB3P0DN86 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CGB3P0DN86 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC12.8□□□□□ -0.36
CGB3P0DN86 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC12.8□□□□□ -0.36
CGB3P0DN86 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CGB3P0DN86 SPDYE18-201ENST00000510091 1050 ntBASIC12.8□□□□□ -0.36
CGB3P0DN86 FTH1-202ENST00000526640 786 ntTSL 2 BASIC12.8□□□□□ -0.36
CGB3P0DN86 AC135586.1-201ENST00000539323 574 ntBASIC12.8□□□□□ -0.36
CGB3P0DN86 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC12.8□□□□□ -0.36
CGB3P0DN86 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.8□□□□□ -0.36
CGB3P0DN86 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.8□□□□□ -0.36
CGB3P0DN86 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC12.8□□□□□ -0.36
CGB3P0DN86 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC12.8□□□□□ -0.36
CGB3P0DN86 ORC5-208ENST00000626700 344 ntTSL 3 BASIC12.8□□□□□ -0.36
CGB3P0DN86 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CGB3P0DN86 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CGB3P0DN86 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CGB3P0DN86 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CGB3P0DN86 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.8□□□□□ -0.36
CGB3P0DN86 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CGB3P0DN86 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CGB3P0DN86 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.8□□□□□ -0.36
CGB3P0DN86 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
CGB3P0DN86 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.8□□□□□ -0.36
CGB3P0DN86 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
CGB3P0DN86 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
CGB3P0DN86 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CGB3P0DN86 WASH3P-207ENST00000560956 1394 ntBASIC12.8□□□□□ -0.36
CGB3P0DN86 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC12.8□□□□□ -0.36
CGB3P0DN86 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
CGB3P0DN86 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
CGB3P0DN86 DBET-201ENST00000630918 3363 ntBASIC12.8□□□□□ -0.36
CGB3P0DN86 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
CGB3P0DN86 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
CGB3P0DN86 FER1L4-210ENST00000615531 5998 ntBASIC12.79□□□□□ -0.36
CGB3P0DN86 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC12.79□□□□□ -0.36
CGB3P0DN86 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC12.79□□□□□ -0.36
CGB3P0DN86 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.79□□□□□ -0.36
CGB3P0DN86 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
CGB3P0DN86 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CGB3P0DN86 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 PKIG-203ENST00000372887 769 ntTSL 3 BASIC12.79□□□□□ -0.36
CGB3P0DN86 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 BASP1P1-201ENST00000430708 665 ntBASIC12.79□□□□□ -0.36
CGB3P0DN86 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.79□□□□□ -0.36
CGB3P0DN86 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.79□□□□□ -0.36
CGB3P0DN86 GAPDHP40-201ENST00000505218 1006 ntBASIC12.79□□□□□ -0.36
CGB3P0DN86 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CGB3P0DN86 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.79□□□□□ -0.36
CGB3P0DN86 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC12.79□□□□□ -0.36
CGB3P0DN86 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
CGB3P0DN86 AQP6-203ENST00000551733 849 ntTSL 3 BASIC12.79□□□□□ -0.36
CGB3P0DN86 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
CGB3P0DN86 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 AL158212.4-201ENST00000624062 1286 ntBASIC12.79□□□□□ -0.36
CGB3P0DN86 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
CGB3P0DN86 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms