Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN1P07384 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC15.47■□□□□ 0.07
CAPN1P07384 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.47■□□□□ 0.07
CAPN1P07384 AL136982.4-201ENST00000437689 1740 ntBASIC15.47■□□□□ 0.07
CAPN1P07384 FAM207CP-201ENST00000443486 507 ntBASIC15.47■□□□□ 0.07
CAPN1P07384 AC027369.6-201ENST00000525520 931 ntBASIC15.47■□□□□ 0.07
CAPN1P07384 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.47■□□□□ 0.07
CAPN1P07384 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN1P07384 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.47■□□□□ 0.07
CAPN1P07384 AL138828.2-201ENST00000615812 383 ntBASIC15.47■□□□□ 0.07
CAPN1P07384 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.47■□□□□ 0.07
CAPN1P07384 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
CAPN1P07384 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN1P07384 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN1P07384 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN1P07384 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.47■□□□□ 0.07
CAPN1P07384 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN1P07384 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN1P07384 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN1P07384 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
CAPN1P07384 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CAPN1P07384 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
CAPN1P07384 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC15.47■□□□□ 0.07
CAPN1P07384 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.47■□□□□ 0.07
CAPN1P07384 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN1P07384 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN1P07384 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC15.46■□□□□ 0.07
CAPN1P07384 AC006486.2-201ENST00000624246 2199 ntBASIC15.46■□□□□ 0.07
CAPN1P07384 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
CAPN1P07384 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN1P07384 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
CAPN1P07384 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN1P07384 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN1P07384 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN1P07384 AL109954.1-202ENST00000564051 2148 ntBASIC15.46■□□□□ 0.07
CAPN1P07384 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC15.46■□□□□ 0.07
CAPN1P07384 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN1P07384 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN1P07384 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN1P07384 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC15.46■□□□□ 0.07
CAPN1P07384 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC15.46■□□□□ 0.07
CAPN1P07384 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN1P07384 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN1P07384 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN1P07384 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC15.46■□□□□ 0.07
CAPN1P07384 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN1P07384 AC004987.2-201ENST00000395959 1148 ntBASIC15.46■□□□□ 0.07
CAPN1P07384 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.46■□□□□ 0.07
CAPN1P07384 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CAPN1P07384 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN1P07384 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN1P07384 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC15.46■□□□□ 0.07
CAPN1P07384 AL512638.1-201ENST00000457493 794 ntBASIC15.46■□□□□ 0.07
CAPN1P07384 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC15.46■□□□□ 0.07
CAPN1P07384 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC15.46■□□□□ 0.07
CAPN1P07384 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CAPN1P07384 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CAPN1P07384 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC15.46■□□□□ 0.07
CAPN1P07384 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.46■□□□□ 0.07
CAPN1P07384 BANF1P1-201ENST00000553684 263 ntBASIC15.46■□□□□ 0.07
CAPN1P07384 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC15.46■□□□□ 0.07
CAPN1P07384 LINC02560-201ENST00000596379 459 ntBASIC15.46■□□□□ 0.07
CAPN1P07384 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.46■□□□□ 0.07
CAPN1P07384 AC008761.3-201ENST00000624803 892 ntBASIC15.46■□□□□ 0.07
CAPN1P07384 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.46■□□□□ 0.07
CAPN1P07384 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN1P07384 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN1P07384 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC15.46■□□□□ 0.07
CAPN1P07384 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN1P07384 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN1P07384 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.46■□□□□ 0.07
CAPN1P07384 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CAPN1P07384 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC15.46■□□□□ 0.07
CAPN1P07384 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CAPN1P07384 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC15.46■□□□□ 0.06
CAPN1P07384 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
CAPN1P07384 AC138035.3-201ENST00000622706 2791 ntBASIC15.46■□□□□ 0.06
CAPN1P07384 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC15.46■□□□□ 0.06
CAPN1P07384 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC15.45■□□□□ 0.06
CAPN1P07384 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CAPN1P07384 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CAPN1P07384 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CAPN1P07384 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CAPN1P07384 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CAPN1P07384 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC15.45■□□□□ 0.06
CAPN1P07384 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CAPN1P07384 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CAPN1P07384 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.45■□□□□ 0.06
CAPN1P07384 GRAMD4P3-201ENST00000621665 1669 ntBASIC15.45■□□□□ 0.06
CAPN1P07384 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CAPN1P07384 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CAPN1P07384 AC009090.5-201ENST00000624886 2285 ntBASIC15.45■□□□□ 0.06
CAPN1P07384 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CAPN1P07384 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CAPN1P07384 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CAPN1P07384 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.45■□□□□ 0.06
CAPN1P07384 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CAPN1P07384 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CAPN1P07384 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CAPN1P07384 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 144.6 ms