Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
MT-ND3P03897 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MT-ND3P03897 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC16.02■□□□□ 0.16
MT-ND3P03897 MARS-233ENST00000628866 2583 ntTSL 5 BASIC16.02■□□□□ 0.16
MT-ND3P03897 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MT-ND3P03897 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MT-ND3P03897 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC16.02■□□□□ 0.16
MT-ND3P03897 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MT-ND3P03897 AKAP8P1-201ENST00000434743 1349 ntBASIC16.02■□□□□ 0.16
MT-ND3P03897 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MT-ND3P03897 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
MT-ND3P03897 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
MT-ND3P03897 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC16.02■□□□□ 0.16
MT-ND3P03897 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC16.02■□□□□ 0.16
MT-ND3P03897 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MT-ND3P03897 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
MT-ND3P03897 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
MT-ND3P03897 ADH5P3-201ENST00000433842 1137 ntBASIC16.02■□□□□ 0.16
MT-ND3P03897 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.02■□□□□ 0.16
MT-ND3P03897 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.02■□□□□ 0.16
MT-ND3P03897 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
MT-ND3P03897 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC16.02■□□□□ 0.16
MT-ND3P03897 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.02■□□□□ 0.16
MT-ND3P03897 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
MT-ND3P03897 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.02■□□□□ 0.16
MT-ND3P03897 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.02■□□□□ 0.16
MT-ND3P03897 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
MT-ND3P03897 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC16.02■□□□□ 0.16
MT-ND3P03897 AC007292.2-201ENST00000593524 1812 ntBASIC16.02■□□□□ 0.16
MT-ND3P03897 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
MT-ND3P03897 AGAP7P-201ENST00000582299 2062 ntBASIC16.02■□□□□ 0.15
MT-ND3P03897 AGAP14-201ENST00000624701 2060 ntBASIC16.02■□□□□ 0.15
MT-ND3P03897 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MT-ND3P03897 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
MT-ND3P03897 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC16.02■□□□□ 0.15
MT-ND3P03897 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
MT-ND3P03897 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
MT-ND3P03897 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND3P03897 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
MT-ND3P03897 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.01■□□□□ 0.15
MT-ND3P03897 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC16.01■□□□□ 0.15
MT-ND3P03897 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND3P03897 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.01■□□□□ 0.15
MT-ND3P03897 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND3P03897 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND3P03897 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC16.01■□□□□ 0.15
MT-ND3P03897 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.01■□□□□ 0.15
MT-ND3P03897 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND3P03897 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.01■□□□□ 0.15
MT-ND3P03897 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND3P03897 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC16.01■□□□□ 0.15
MT-ND3P03897 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND3P03897 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND3P03897 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
MT-ND3P03897 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND3P03897 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND3P03897 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND3P03897 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.01■□□□□ 0.15
MT-ND3P03897 AC067863.1-201ENST00000494933 530 ntBASIC16.01■□□□□ 0.15
MT-ND3P03897 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC16.01■□□□□ 0.15
MT-ND3P03897 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC16.01■□□□□ 0.15
MT-ND3P03897 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND3P03897 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.01■□□□□ 0.15
MT-ND3P03897 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC16.01■□□□□ 0.15
MT-ND3P03897 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.01■□□□□ 0.15
MT-ND3P03897 RARRES2P8-201ENST00000566335 367 ntBASIC16.01■□□□□ 0.15
MT-ND3P03897 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.01■□□□□ 0.15
MT-ND3P03897 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.01■□□□□ 0.15
MT-ND3P03897 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND3P03897 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
MT-ND3P03897 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND3P03897 LINC00628-201ENST00000628516 1289 ntBASIC16.01■□□□□ 0.15
MT-ND3P03897 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC16.01■□□□□ 0.15
MT-ND3P03897 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND3P03897 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
MT-ND3P03897 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC16.01■□□□□ 0.15
MT-ND3P03897 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND3P03897 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND3P03897 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND3P03897 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND3P03897 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.01■□□□□ 0.15
MT-ND3P03897 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND3P03897 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.01■□□□□ 0.15
MT-ND3P03897 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.01■□□□□ 0.15
MT-ND3P03897 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND3P03897 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.01■□□□□ 0.15
MT-ND3P03897 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND3P03897 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND3P03897 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND3P03897 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC16.01■□□□□ 0.15
MT-ND3P03897 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
MT-ND3P03897 AC018892.3-201ENST00000623986 2499 ntBASIC16.01■□□□□ 0.15
MT-ND3P03897 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
MT-ND3P03897 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
MT-ND3P03897 KRT8P44-201ENST00000441609 1350 ntBASIC16■□□□□ 0.15
MT-ND3P03897 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16■□□□□ 0.15
MT-ND3P03897 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC16■□□□□ 0.15
MT-ND3P03897 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC16■□□□□ 0.15
MT-ND3P03897 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
MT-ND3P03897 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms