Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTA1P02549 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC14.11□□□□□ -0.15
SPTA1P02549 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SPTA1P02549 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
SPTA1P02549 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTA1P02549 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTA1P02549 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.11□□□□□ -0.15
SPTA1P02549 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTA1P02549 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTA1P02549 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTA1P02549 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC14.11□□□□□ -0.15
SPTA1P02549 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.11□□□□□ -0.15
SPTA1P02549 HIST2H2BB-201ENST00000449108 381 ntBASIC14.11□□□□□ -0.15
SPTA1P02549 RN7SL181P-201ENST00000462921 277 ntBASIC14.11□□□□□ -0.15
SPTA1P02549 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTA1P02549 SUPT4H1P2-201ENST00000501248 353 ntBASIC14.11□□□□□ -0.15
SPTA1P02549 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC14.11□□□□□ -0.15
SPTA1P02549 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.11□□□□□ -0.15
SPTA1P02549 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC14.11□□□□□ -0.15
SPTA1P02549 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC14.11□□□□□ -0.15
SPTA1P02549 AC013355.1-201ENST00000562625 723 ntBASIC14.11□□□□□ -0.15
SPTA1P02549 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPTA1P02549 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC14.11□□□□□ -0.15
SPTA1P02549 RN7SL736P-201ENST00000613111 269 ntBASIC14.11□□□□□ -0.15
SPTA1P02549 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPTA1P02549 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPTA1P02549 AC092171.3-201ENST00000610122 2651 ntBASIC14.11□□□□□ -0.15
SPTA1P02549 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC14.11□□□□□ -0.15
SPTA1P02549 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.11□□□□□ -0.15
SPTA1P02549 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTA1P02549 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.11□□□□□ -0.15
SPTA1P02549 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
SPTA1P02549 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
SPTA1P02549 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
SPTA1P02549 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC14.1□□□□□ -0.15
SPTA1P02549 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTA1P02549 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SPTA1P02549 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTA1P02549 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SPTA1P02549 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SPTA1P02549 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTA1P02549 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTA1P02549 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTA1P02549 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
SPTA1P02549 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTA1P02549 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC14.1□□□□□ -0.15
SPTA1P02549 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.1□□□□□ -0.15
SPTA1P02549 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTA1P02549 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTA1P02549 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SPTA1P02549 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
SPTA1P02549 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
SPTA1P02549 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.1□□□□□ -0.15
SPTA1P02549 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC14.1□□□□□ -0.15
SPTA1P02549 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTA1P02549 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
SPTA1P02549 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTA1P02549 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SPTA1P02549 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTA1P02549 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SPTA1P02549 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SPTA1P02549 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTA1P02549 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
SPTA1P02549 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC14.1□□□□□ -0.15
SPTA1P02549 NUDT1-201ENST00000339737 698 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTA1P02549 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTA1P02549 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.1□□□□□ -0.15
SPTA1P02549 AC024681.1-201ENST00000521917 487 ntBASIC14.1□□□□□ -0.15
SPTA1P02549 AL161670.2-201ENST00000557650 1227 ntBASIC14.1□□□□□ -0.15
SPTA1P02549 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.1□□□□□ -0.15
SPTA1P02549 AL451050.2-201ENST00000606967 682 ntBASIC14.1□□□□□ -0.15
SPTA1P02549 ZACNP1-201ENST00000612259 710 ntBASIC14.1□□□□□ -0.15
SPTA1P02549 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.1□□□□□ -0.15
SPTA1P02549 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC14.1□□□□□ -0.15
SPTA1P02549 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTA1P02549 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC14.1□□□□□ -0.15
SPTA1P02549 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
SPTA1P02549 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
SPTA1P02549 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
SPTA1P02549 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTA1P02549 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC14.1□□□□□ -0.15
SPTA1P02549 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
SPTA1P02549 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTA1P02549 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC14.09□□□□□ -0.15
SPTA1P02549 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC14.09□□□□□ -0.15
SPTA1P02549 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTA1P02549 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTA1P02549 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC14.09□□□□□ -0.15
SPTA1P02549 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC14.09□□□□□ -0.15
SPTA1P02549 BANP-227ENST00000626016 2144 ntTSL 2 BASIC14.09□□□□□ -0.15
SPTA1P02549 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SPTA1P02549 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SPTA1P02549 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTA1P02549 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SPTA1P02549 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.09□□□□□ -0.15
SPTA1P02549 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.09□□□□□ -0.15
SPTA1P02549 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.09□□□□□ -0.15
SPTA1P02549 CMC1-204ENST00000423894 549 ntTSL 2 BASIC14.09□□□□□ -0.15
SPTA1P02549 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.09□□□□□ -0.15
SPTA1P02549 AC012618.1-201ENST00000461223 412 ntBASIC14.09□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms