Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.62■□□□□ 0.25
TIMP1P01033 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
TIMP1P01033 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
TIMP1P01033 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TIMP1P01033 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TIMP1P01033 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
TIMP1P01033 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TIMP1P01033 RN7SKP214-201ENST00000364208 315 ntBASIC16.62■□□□□ 0.25
TIMP1P01033 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TIMP1P01033 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TIMP1P01033 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TIMP1P01033 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TIMP1P01033 AC116345.2-201ENST00000512837 523 ntBASIC16.62■□□□□ 0.25
TIMP1P01033 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TIMP1P01033 NPM1P43-201ENST00000558669 786 ntBASIC16.62■□□□□ 0.25
TIMP1P01033 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TIMP1P01033 SAMD11P1-201ENST00000571429 661 ntBASIC16.62■□□□□ 0.25
TIMP1P01033 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC16.62■□□□□ 0.25
TIMP1P01033 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TIMP1P01033 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.62■□□□□ 0.25
TIMP1P01033 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TIMP1P01033 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC16.62■□□□□ 0.25
TIMP1P01033 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.62■□□□□ 0.25
TIMP1P01033 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.62■□□□□ 0.25
TIMP1P01033 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TIMP1P01033 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.61■□□□□ 0.25
TIMP1P01033 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMP1P01033 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TIMP1P01033 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TIMP1P01033 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.61■□□□□ 0.25
TIMP1P01033 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.61■□□□□ 0.25
TIMP1P01033 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMP1P01033 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TIMP1P01033 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMP1P01033 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TIMP1P01033 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC16.61■□□□□ 0.25
TIMP1P01033 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
TIMP1P01033 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TIMP1P01033 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
TIMP1P01033 ISCA2P1-201ENST00000425548 448 ntBASIC16.61■□□□□ 0.25
TIMP1P01033 RN7SL181P-201ENST00000462921 277 ntBASIC16.61■□□□□ 0.25
TIMP1P01033 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TIMP1P01033 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.61■□□□□ 0.25
TIMP1P01033 AC242376.1-201ENST00000559033 726 ntBASIC16.61■□□□□ 0.25
TIMP1P01033 AC100827.2-201ENST00000563214 1194 ntBASIC16.61■□□□□ 0.25
TIMP1P01033 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC16.61■□□□□ 0.25
TIMP1P01033 WDR7-208ENST00000589935 544 ntTSL 4 BASIC16.61■□□□□ 0.25
TIMP1P01033 UPK1A-204ENST00000617999 1268 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TIMP1P01033 AL645728.2-202ENST00000641679 227 ntBASIC16.61■□□□□ 0.25
TIMP1P01033 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TIMP1P01033 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMP1P01033 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
TIMP1P01033 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMP1P01033 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TIMP1P01033 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMP1P01033 AC055811.4-201ENST00000624039 1754 ntBASIC16.61■□□□□ 0.25
TIMP1P01033 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMP1P01033 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
TIMP1P01033 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMP1P01033 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMP1P01033 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMP1P01033 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
TIMP1P01033 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
TIMP1P01033 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TIMP1P01033 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TIMP1P01033 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TIMP1P01033 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TIMP1P01033 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TIMP1P01033 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.6■□□□□ 0.25
TIMP1P01033 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TIMP1P01033 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TIMP1P01033 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
TIMP1P01033 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TIMP1P01033 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.6■□□□□ 0.25
TIMP1P01033 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
TIMP1P01033 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
TIMP1P01033 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.6■□□□□ 0.25
TIMP1P01033 RNASE10-201ENST00000328444 717 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TIMP1P01033 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
TIMP1P01033 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC16.6■□□□□ 0.25
TIMP1P01033 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TIMP1P01033 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TIMP1P01033 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.6■□□□□ 0.25
TIMP1P01033 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.6■□□□□ 0.25
TIMP1P01033 CSTF3-206ENST00000524827 693 ntTSL 3 BASIC16.6■□□□□ 0.25
TIMP1P01033 NDUFC2-KCTD14-202ENST00000530054 656 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
TIMP1P01033 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.6■□□□□ 0.25
TIMP1P01033 AL160314.3-201ENST00000556041 767 ntBASIC16.6■□□□□ 0.25
TIMP1P01033 SNORD3B-2-202ENST00000571722 791 ntBASIC16.6■□□□□ 0.25
TIMP1P01033 MIR4683-201ENST00000579659 81 ntBASIC16.6■□□□□ 0.25
TIMP1P01033 MIR4783-201ENST00000580343 82 ntBASIC16.6■□□□□ 0.25
TIMP1P01033 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TIMP1P01033 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TIMP1P01033 AC004466.1-201ENST00000599515 1080 ntBASIC16.6■□□□□ 0.25
TIMP1P01033 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC16.6■□□□□ 0.25
TIMP1P01033 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC16.6■□□□□ 0.25
TIMP1P01033 AL136301.1-201ENST00000615830 422 ntBASIC16.6■□□□□ 0.25
TIMP1P01033 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
TIMP1P01033 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TIMP1P01033 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms