Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE6O95741 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE6O95741 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC15.39■□□□□ 0.05
CPNE6O95741 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CPNE6O95741 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE6O95741 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE6O95741 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE6O95741 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE6O95741 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.39■□□□□ 0.05
CPNE6O95741 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CPNE6O95741 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE6O95741 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CPNE6O95741 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CPNE6O95741 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC15.38■□□□□ 0.05
CPNE6O95741 CICP13-201ENST00000422015 2789 ntBASIC15.38■□□□□ 0.05
CPNE6O95741 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE6O95741 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
CPNE6O95741 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.38■□□□□ 0.05
CPNE6O95741 KRT8P37-201ENST00000451609 1420 ntBASIC15.38■□□□□ 0.05
CPNE6O95741 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE6O95741 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.38■□□□□ 0.05
CPNE6O95741 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
CPNE6O95741 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE6O95741 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC15.38■□□□□ 0.05
CPNE6O95741 AC098850.1-201ENST00000419919 790 ntBASIC15.38■□□□□ 0.05
CPNE6O95741 EEF1DP4-201ENST00000446006 880 ntBASIC15.38■□□□□ 0.05
CPNE6O95741 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.38■□□□□ 0.05
CPNE6O95741 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC15.38■□□□□ 0.05
CPNE6O95741 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.38■□□□□ 0.05
CPNE6O95741 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC15.38■□□□□ 0.05
CPNE6O95741 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
CPNE6O95741 AC004477.1-202ENST00000584428 539 ntTSL 2 BASIC15.38■□□□□ 0.05
CPNE6O95741 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC15.38■□□□□ 0.05
CPNE6O95741 CD300LG-205ENST00000586233 942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE6O95741 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.38■□□□□ 0.05
CPNE6O95741 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.38■□□□□ 0.05
CPNE6O95741 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC15.38■□□□□ 0.05
CPNE6O95741 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE6O95741 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC15.38■□□□□ 0.05
CPNE6O95741 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.38■□□□□ 0.05
CPNE6O95741 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE6O95741 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE6O95741 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC15.38■□□□□ 0.05
CPNE6O95741 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CPNE6O95741 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC15.38■□□□□ 0.05
CPNE6O95741 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE6O95741 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.38■□□□□ 0.05
CPNE6O95741 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE6O95741 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE6O95741 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE6O95741 SP100-205ENST00000409824 1802 ntTSL 5 BASIC15.38■□□□□ 0.05
CPNE6O95741 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE6O95741 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE6O95741 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CPNE6O95741 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE6O95741 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE6O95741 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
CPNE6O95741 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE6O95741 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE6O95741 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.37■□□□□ 0.05
CPNE6O95741 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CPNE6O95741 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.37■□□□□ 0.05
CPNE6O95741 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE6O95741 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE6O95741 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.37■□□□□ 0.05
CPNE6O95741 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
CPNE6O95741 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC15.37■□□□□ 0.05
CPNE6O95741 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
CPNE6O95741 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE6O95741 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.37■□□□□ 0.05
CPNE6O95741 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.37■□□□□ 0.05
CPNE6O95741 GLI4-203ENST00000517468 963 ntTSL 5 BASIC15.37■□□□□ 0.05
CPNE6O95741 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC15.37■□□□□ 0.05
CPNE6O95741 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC15.37■□□□□ 0.05
CPNE6O95741 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC15.37■□□□□ 0.05
CPNE6O95741 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC15.37■□□□□ 0.05
CPNE6O95741 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
CPNE6O95741 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC15.37■□□□□ 0.05
CPNE6O95741 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.37■□□□□ 0.05
CPNE6O95741 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE6O95741 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC15.37■□□□□ 0.05
CPNE6O95741 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE6O95741 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
CPNE6O95741 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC15.37■□□□□ 0.05
CPNE6O95741 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE6O95741 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.37■□□□□ 0.05
CPNE6O95741 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE6O95741 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE6O95741 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE6O95741 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
CPNE6O95741 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.37■□□□□ 0.05
CPNE6O95741 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.37■□□□□ 0.05
CPNE6O95741 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.36■□□□□ 0.05
CPNE6O95741 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
CPNE6O95741 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPNE6O95741 FER1L4-210ENST00000615531 5998 ntBASIC15.36■□□□□ 0.05
CPNE6O95741 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
CPNE6O95741 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.36■□□□□ 0.05
CPNE6O95741 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.36■□□□□ 0.05
CPNE6O95741 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms