Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GPC4O75487 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
GPC4O75487 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GPC4O75487 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
GPC4O75487 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
GPC4O75487 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
GPC4O75487 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
GPC4O75487 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
GPC4O75487 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
GPC4O75487 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GPC4O75487 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GPC4O75487 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.75■□□□□ 0.11
GPC4O75487 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC15.75■□□□□ 0.11
GPC4O75487 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GPC4O75487 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GPC4O75487 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC15.75■□□□□ 0.11
GPC4O75487 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GPC4O75487 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GPC4O75487 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GPC4O75487 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC15.75■□□□□ 0.11
GPC4O75487 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GPC4O75487 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GPC4O75487 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GPC4O75487 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GPC4O75487 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GPC4O75487 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GPC4O75487 SPDYE17-201ENST00000412399 783 ntBASIC15.75■□□□□ 0.11
GPC4O75487 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
GPC4O75487 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.75■□□□□ 0.11
GPC4O75487 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.75■□□□□ 0.11
GPC4O75487 EEF1DP4-201ENST00000446006 880 ntBASIC15.75■□□□□ 0.11
GPC4O75487 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC15.75■□□□□ 0.11
GPC4O75487 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.75■□□□□ 0.11
GPC4O75487 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.75■□□□□ 0.11
GPC4O75487 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
GPC4O75487 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
GPC4O75487 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC15.75■□□□□ 0.11
GPC4O75487 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC15.75■□□□□ 0.11
GPC4O75487 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
GPC4O75487 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GPC4O75487 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GPC4O75487 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
GPC4O75487 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GPC4O75487 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GPC4O75487 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
GPC4O75487 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
GPC4O75487 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GPC4O75487 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GPC4O75487 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
GPC4O75487 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC15.74■□□□□ 0.11
GPC4O75487 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GPC4O75487 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
GPC4O75487 AC087481.3-201ENST00000602886 1894 ntBASIC15.74■□□□□ 0.11
GPC4O75487 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
GPC4O75487 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GPC4O75487 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.74■□□□□ 0.11
GPC4O75487 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GPC4O75487 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.74■□□□□ 0.11
GPC4O75487 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GPC4O75487 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.74■□□□□ 0.11
GPC4O75487 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
GPC4O75487 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
GPC4O75487 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.74■□□□□ 0.11
GPC4O75487 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.74■□□□□ 0.11
GPC4O75487 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.74■□□□□ 0.11
GPC4O75487 CNN2P2-201ENST00000443536 909 ntBASIC15.74■□□□□ 0.11
GPC4O75487 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC15.74■□□□□ 0.11
GPC4O75487 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GPC4O75487 CNN2P3-201ENST00000450201 906 ntBASIC15.74■□□□□ 0.11
GPC4O75487 PPP6R2P1-201ENST00000450880 1275 ntBASIC15.74■□□□□ 0.11
GPC4O75487 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.74■□□□□ 0.11
GPC4O75487 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC15.74■□□□□ 0.11
GPC4O75487 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GPC4O75487 RPL28-205ENST00000558131 444 ntTSL 5 BASIC15.74■□□□□ 0.11
GPC4O75487 AC051619.7-201ENST00000568314 623 ntBASIC15.74■□□□□ 0.11
GPC4O75487 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC15.74■□□□□ 0.11
GPC4O75487 LSM12-202ENST00000585388 942 ntTSL 3 BASIC15.74■□□□□ 0.11
GPC4O75487 AL136317.3-201ENST00000618497 906 ntBASIC15.74■□□□□ 0.11
GPC4O75487 AC093028.1-201ENST00000622998 982 ntBASIC15.74■□□□□ 0.11
GPC4O75487 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC15.74■□□□□ 0.11
GPC4O75487 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
GPC4O75487 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.74■□□□□ 0.11
GPC4O75487 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
GPC4O75487 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GPC4O75487 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC15.74■□□□□ 0.11
GPC4O75487 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC15.74■□□□□ 0.11
GPC4O75487 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GPC4O75487 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.74■□□□□ 0.11
GPC4O75487 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC15.74■□□□□ 0.11
GPC4O75487 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
GPC4O75487 GLIS2-201ENST00000262366 4469 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
GPC4O75487 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GPC4O75487 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
GPC4O75487 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.73■□□□□ 0.11
GPC4O75487 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
GPC4O75487 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
GPC4O75487 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GPC4O75487 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.73■□□□□ 0.11
GPC4O75487 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
GPC4O75487 TUBB3P1-201ENST00000405796 1332 ntBASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms