Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.26■□□□□ 0.19
LRCH4O75427 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.26■□□□□ 0.19
LRCH4O75427 AC093512.1-201ENST00000617969 520 ntBASIC16.26■□□□□ 0.19
LRCH4O75427 CYP2AB1P-202ENST00000454440 1456 ntBASIC16.26■□□□□ 0.19
LRCH4O75427 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH4O75427 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH4O75427 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH4O75427 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC16.26■□□□□ 0.19
LRCH4O75427 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.26■□□□□ 0.19
LRCH4O75427 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH4O75427 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH4O75427 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH4O75427 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH4O75427 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH4O75427 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
LRCH4O75427 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH4O75427 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
LRCH4O75427 POR-201ENST00000394893 2532 ntTSL 5 BASIC16.25■□□□□ 0.19
LRCH4O75427 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH4O75427 EDN3-201ENST00000311585 2655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH4O75427 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH4O75427 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH4O75427 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH4O75427 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH4O75427 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH4O75427 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LRCH4O75427 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH4O75427 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH4O75427 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH4O75427 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH4O75427 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH4O75427 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH4O75427 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH4O75427 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.25■□□□□ 0.19
LRCH4O75427 VMA21-202ENST00000370361 693 ntTSL 5 BASIC16.25■□□□□ 0.19
LRCH4O75427 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.25■□□□□ 0.19
LRCH4O75427 HMGN1P19-201ENST00000436976 333 ntBASIC16.25■□□□□ 0.19
LRCH4O75427 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.25■□□□□ 0.19
LRCH4O75427 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.25■□□□□ 0.19
LRCH4O75427 AC004890.2-204ENST00000481968 304 ntBASIC16.25■□□□□ 0.19
LRCH4O75427 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC16.25■□□□□ 0.19
LRCH4O75427 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH4O75427 AC106028.4-201ENST00000614509 607 ntBASIC16.25■□□□□ 0.19
LRCH4O75427 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.25■□□□□ 0.19
LRCH4O75427 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
LRCH4O75427 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH4O75427 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LRCH4O75427 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
LRCH4O75427 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.25■□□□□ 0.19
LRCH4O75427 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
LRCH4O75427 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.25■□□□□ 0.19
LRCH4O75427 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH4O75427 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC16.25■□□□□ 0.19
LRCH4O75427 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH4O75427 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH4O75427 MROH4P-201ENST00000431302 1578 ntBASIC16.25■□□□□ 0.19
LRCH4O75427 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.25■□□□□ 0.19
LRCH4O75427 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH4O75427 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH4O75427 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.25■□□□□ 0.19
LRCH4O75427 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
LRCH4O75427 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC16.25■□□□□ 0.19
LRCH4O75427 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH4O75427 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH4O75427 PTGES3L-AARSD1-204ENST00000421990 2150 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LRCH4O75427 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LRCH4O75427 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH4O75427 BTBD7P1-201ENST00000447253 1453 ntBASIC16.24■□□□□ 0.19
LRCH4O75427 AC138969.3-201ENST00000546612 1459 ntBASIC16.24■□□□□ 0.19
LRCH4O75427 AC138932.2-201ENST00000548268 1459 ntBASIC16.24■□□□□ 0.19
LRCH4O75427 AC126755.4-201ENST00000549796 1459 ntBASIC16.24■□□□□ 0.19
LRCH4O75427 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.24■□□□□ 0.19
LRCH4O75427 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH4O75427 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LRCH4O75427 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH4O75427 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC16.24■□□□□ 0.19
LRCH4O75427 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.24■□□□□ 0.19
LRCH4O75427 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH4O75427 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.24■□□□□ 0.19
LRCH4O75427 AL583722.3-202ENST00000554954 486 ntTSL 4 BASIC16.24■□□□□ 0.19
LRCH4O75427 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.24■□□□□ 0.19
LRCH4O75427 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC16.24■□□□□ 0.19
LRCH4O75427 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
LRCH4O75427 AC027796.2-201ENST00000575326 344 ntBASIC16.24■□□□□ 0.19
LRCH4O75427 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC16.24■□□□□ 0.19
LRCH4O75427 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
LRCH4O75427 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC16.24■□□□□ 0.19
LRCH4O75427 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
LRCH4O75427 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH4O75427 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH4O75427 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH4O75427 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.24■□□□□ 0.19
LRCH4O75427 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH4O75427 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
LRCH4O75427 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
LRCH4O75427 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.24■□□□□ 0.19
LRCH4O75427 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LRCH4O75427 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
LRCH4O75427 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC16.24■□□□□ 0.19
LRCH4O75427 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms