Protein–RNA interactions for Protein: O60494

CUBN, Cubilin, humanhuman

Predictions only

Length 3,623 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNO60494 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC12.27□□□□□ -0.44
CUBNO60494 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.44
CUBNO60494 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
CUBNO60494 WAC-202ENST00000347934 2839 ntTSL 5 BASIC12.27□□□□□ -0.44
CUBNO60494 HIGD1A-202ENST00000418900 1322 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
CUBNO60494 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CUBNO60494 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC12.27□□□□□ -0.44
CUBNO60494 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.27□□□□□ -0.44
CUBNO60494 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC12.27□□□□□ -0.44
CUBNO60494 AC246817.2-203ENST00000517357 569 ntTSL 4 BASIC12.27□□□□□ -0.44
CUBNO60494 AC246817.2-202ENST00000519393 564 ntTSL 4 BASIC12.27□□□□□ -0.44
CUBNO60494 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CUBNO60494 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CUBNO60494 RTN3P1-201ENST00000536295 711 ntBASIC12.27□□□□□ -0.44
CUBNO60494 AC106820.3-201ENST00000561653 397 ntBASIC12.27□□□□□ -0.44
CUBNO60494 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC12.27□□□□□ -0.44
CUBNO60494 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
CUBNO60494 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC12.27□□□□□ -0.44
CUBNO60494 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC12.27□□□□□ -0.44
CUBNO60494 AC051619.9-201ENST00000623237 597 ntBASIC12.27□□□□□ -0.44
CUBNO60494 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.27□□□□□ -0.44
CUBNO60494 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC12.27□□□□□ -0.44
CUBNO60494 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CUBNO60494 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.27□□□□□ -0.45
CUBNO60494 SLC9A7P1-202ENST00000556476 2239 ntBASIC12.27□□□□□ -0.45
CUBNO60494 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
CUBNO60494 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CUBNO60494 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CUBNO60494 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CUBNO60494 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CUBNO60494 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.27□□□□□ -0.45
CUBNO60494 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CUBNO60494 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
CUBNO60494 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC12.27□□□□□ -0.45
CUBNO60494 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC12.27□□□□□ -0.45
CUBNO60494 NCK1-AS1-203ENST00000474250 827 ntTSL 2 BASIC12.27□□□□□ -0.45
CUBNO60494 AC100850.1-201ENST00000506768 649 ntBASIC12.27□□□□□ -0.45
CUBNO60494 DNM1P30-201ENST00000563586 452 ntBASIC12.27□□□□□ -0.45
CUBNO60494 MIR4683-201ENST00000579659 81 ntBASIC12.27□□□□□ -0.45
CUBNO60494 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
CUBNO60494 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
CUBNO60494 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
CUBNO60494 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CUBNO60494 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
CUBNO60494 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC12.27□□□□□ -0.45
CUBNO60494 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CUBNO60494 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.26□□□□□ -0.45
CUBNO60494 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CUBNO60494 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.26□□□□□ -0.45
CUBNO60494 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
CUBNO60494 AC078991.1-201ENST00000437297 610 ntBASIC12.26□□□□□ -0.45
CUBNO60494 RNMTL1P1-201ENST00000454103 560 ntBASIC12.26□□□□□ -0.45
CUBNO60494 POU5F1P6-201ENST00000466990 990 ntBASIC12.26□□□□□ -0.45
CUBNO60494 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC12.26□□□□□ -0.45
CUBNO60494 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.26□□□□□ -0.45
CUBNO60494 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.26□□□□□ -0.45
CUBNO60494 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC12.26□□□□□ -0.45
CUBNO60494 IRF3-225ENST00000600022 882 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CUBNO60494 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC12.26□□□□□ -0.45
CUBNO60494 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CUBNO60494 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CUBNO60494 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
CUBNO60494 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CUBNO60494 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CUBNO60494 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CUBNO60494 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CUBNO60494 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CUBNO60494 FZR1-201ENST00000313639 1215 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CUBNO60494 SETD7-203ENST00000406354 1127 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CUBNO60494 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC12.26□□□□□ -0.45
CUBNO60494 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.26□□□□□ -0.45
CUBNO60494 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC12.26□□□□□ -0.45
CUBNO60494 AP001002.3-201ENST00000623482 206 ntBASIC12.26□□□□□ -0.45
CUBNO60494 AC100757.4-201ENST00000626934 759 ntBASIC12.26□□□□□ -0.45
CUBNO60494 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
CUBNO60494 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CUBNO60494 AC007787.1-201ENST00000588095 1583 ntBASIC12.26□□□□□ -0.45
CUBNO60494 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC12.26□□□□□ -0.45
CUBNO60494 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC12.26□□□□□ -0.45
CUBNO60494 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CUBNO60494 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CUBNO60494 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.26□□□□□ -0.45
CUBNO60494 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
CUBNO60494 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CUBNO60494 NIPAL3-204ENST00000374399 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CUBNO60494 SLC16A6P1-201ENST00000413214 1059 ntBASIC12.26□□□□□ -0.45
CUBNO60494 AL133466.1-201ENST00000447582 150 ntBASIC12.26□□□□□ -0.45
CUBNO60494 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.26□□□□□ -0.45
CUBNO60494 AC005740.2-201ENST00000511085 419 ntBASIC12.26□□□□□ -0.45
CUBNO60494 UPF3AP2-202ENST00000578315 730 ntTSL 5 BASIC12.26□□□□□ -0.45
CUBNO60494 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CUBNO60494 AC012044.1-201ENST00000603431 297 ntBASIC12.26□□□□□ -0.45
CUBNO60494 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CUBNO60494 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
CUBNO60494 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC12.26□□□□□ -0.45
CUBNO60494 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
CUBNO60494 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
CUBNO60494 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.26□□□□□ -0.45
CUBNO60494 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.26□□□□□ -0.45
CUBNO60494 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms