Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
ZIC3O60481 AL162726.2-201ENST00000438986 1017 ntBASIC14.01□□□□□ -0.17
ZIC3O60481 KRT17P7-201ENST00000451704 1104 ntBASIC14.01□□□□□ -0.17
ZIC3O60481 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC14.01□□□□□ -0.17
ZIC3O60481 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC14.01□□□□□ -0.17
ZIC3O60481 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC14.01□□□□□ -0.17
ZIC3O60481 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC14.01□□□□□ -0.17
ZIC3O60481 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC3O60481 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC14.01□□□□□ -0.17
ZIC3O60481 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.01□□□□□ -0.17
ZIC3O60481 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
ZIC3O60481 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC3O60481 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC3O60481 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC3O60481 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC3O60481 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC3O60481 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC14.01□□□□□ -0.17
ZIC3O60481 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC3O60481 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
ZIC3O60481 AC087481.3-201ENST00000602886 1894 ntBASIC14.01□□□□□ -0.17
ZIC3O60481 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC3O60481 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC3O60481 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.01□□□□□ -0.17
ZIC3O60481 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC3O60481 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
ZIC3O60481 AL138799.1-201ENST00000448213 1675 ntBASIC14.01□□□□□ -0.17
ZIC3O60481 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.01□□□□□ -0.17
ZIC3O60481 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
ZIC3O60481 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
ZIC3O60481 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14□□□□□ -0.17
ZIC3O60481 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14□□□□□ -0.17
ZIC3O60481 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC14□□□□□ -0.17
ZIC3O60481 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC14□□□□□ -0.17
ZIC3O60481 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC14□□□□□ -0.17
ZIC3O60481 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14□□□□□ -0.17
ZIC3O60481 AC136621.1-201ENST00000624017 2304 ntBASIC14□□□□□ -0.17
ZIC3O60481 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14□□□□□ -0.17
ZIC3O60481 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC14□□□□□ -0.17
ZIC3O60481 C1orf68-201ENST00000368775 949 ntAPPRIS P1 BASIC14□□□□□ -0.17
ZIC3O60481 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC14□□□□□ -0.17
ZIC3O60481 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14□□□□□ -0.17
ZIC3O60481 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC14□□□□□ -0.17
ZIC3O60481 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC14□□□□□ -0.17
ZIC3O60481 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14□□□□□ -0.17
ZIC3O60481 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14□□□□□ -0.17
ZIC3O60481 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 FUZ-207ENST00000526575 482 ntTSL 4 BASIC14□□□□□ -0.17
ZIC3O60481 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC14□□□□□ -0.17
ZIC3O60481 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC14□□□□□ -0.17
ZIC3O60481 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14□□□□□ -0.17
ZIC3O60481 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC14□□□□□ -0.17
ZIC3O60481 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC14□□□□□ -0.17
ZIC3O60481 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14□□□□□ -0.17
ZIC3O60481 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 ZNF451-203ENST00000370706 5268 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC14□□□□□ -0.17
ZIC3O60481 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC14□□□□□ -0.17
ZIC3O60481 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
ZIC3O60481 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC14□□□□□ -0.17
ZIC3O60481 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14□□□□□ -0.17
ZIC3O60481 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
ZIC3O60481 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC13.99□□□□□ -0.17
ZIC3O60481 AGER-206ENST00000375070 1463 ntTSL 5 BASIC13.99□□□□□ -0.17
ZIC3O60481 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC3O60481 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC3O60481 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC3O60481 SSR4P1-203ENST00000599569 2260 ntBASIC13.99□□□□□ -0.17
ZIC3O60481 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC3O60481 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.99□□□□□ -0.17
ZIC3O60481 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC3O60481 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC3O60481 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC3O60481 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC3O60481 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC3O60481 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
ZIC3O60481 GTF3C5-204ENST00000372108 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
ZIC3O60481 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 54.4 ms