Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC28A2O43868 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC28A2O43868 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
SLC28A2O43868 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC28A2O43868 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC28A2O43868 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.15■□□□□ 0.02
SLC28A2O43868 AL035456.1-201ENST00000456064 1369 ntBASIC15.15■□□□□ 0.02
SLC28A2O43868 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC28A2O43868 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC28A2O43868 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC28A2O43868 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC28A2O43868 TPI1-206ENST00000488464 791 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC28A2O43868 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC28A2O43868 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC28A2O43868 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC28A2O43868 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC28A2O43868 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC15.15■□□□□ 0.02
SLC28A2O43868 ORC6-206ENST00000568364 888 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC28A2O43868 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC15.15■□□□□ 0.02
SLC28A2O43868 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC28A2O43868 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC15.15■□□□□ 0.02
SLC28A2O43868 AL365330.1-201ENST00000607459 531 ntBASIC15.15■□□□□ 0.02
SLC28A2O43868 AL589739.1-201ENST00000607720 493 ntBASIC15.15■□□□□ 0.02
SLC28A2O43868 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC28A2O43868 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.15■□□□□ 0.02
SLC28A2O43868 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC28A2O43868 AC073439.1-201ENST00000624121 1774 ntBASIC15.15■□□□□ 0.02
SLC28A2O43868 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC28A2O43868 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC28A2O43868 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.15■□□□□ 0.02
SLC28A2O43868 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC28A2O43868 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC28A2O43868 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SLC28A2O43868 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
SLC28A2O43868 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
SLC28A2O43868 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC28A2O43868 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC28A2O43868 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
SLC28A2O43868 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.15■□□□□ 0.02
SLC28A2O43868 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.15■□□□□ 0.02
SLC28A2O43868 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.02
SLC28A2O43868 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC15.14■□□□□ 0.01
SLC28A2O43868 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A2O43868 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC28A2O43868 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A2O43868 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A2O43868 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SLC28A2O43868 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A2O43868 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A2O43868 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A2O43868 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SLC28A2O43868 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A2O43868 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC15.14■□□□□ 0.01
SLC28A2O43868 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A2O43868 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SLC28A2O43868 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A2O43868 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC28A2O43868 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC28A2O43868 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A2O43868 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC28A2O43868 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC28A2O43868 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC28A2O43868 DOC2GP-202ENST00000514950 1163 ntBASIC15.14■□□□□ 0.01
SLC28A2O43868 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A2O43868 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC28A2O43868 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC15.14■□□□□ 0.01
SLC28A2O43868 AC103810.3-201ENST00000583567 96 ntBASIC15.14■□□□□ 0.01
SLC28A2O43868 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A2O43868 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A2O43868 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A2O43868 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SLC28A2O43868 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A2O43868 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A2O43868 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
SLC28A2O43868 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SLC28A2O43868 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A2O43868 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
SLC28A2O43868 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.14■□□□□ 0.01
SLC28A2O43868 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SLC28A2O43868 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC15.14■□□□□ 0.01
SLC28A2O43868 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
SLC28A2O43868 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC28A2O43868 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SLC28A2O43868 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.13■□□□□ 0.01
SLC28A2O43868 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SLC28A2O43868 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC28A2O43868 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC28A2O43868 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC28A2O43868 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SLC28A2O43868 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC28A2O43868 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SLC28A2O43868 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC28A2O43868 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SLC28A2O43868 BRWD1P1-201ENST00000401091 371 ntBASIC15.13■□□□□ 0.01
SLC28A2O43868 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC28A2O43868 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SLC28A2O43868 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC28A2O43868 AL353705.2-201ENST00000428243 662 ntBASIC15.13■□□□□ 0.01
SLC28A2O43868 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC28A2O43868 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 66.9 ms