Protein–RNA interactions for Protein: O15516

CLOCK, Circadian locomoter output cycles protein kaput, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCKO15516 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLOCKO15516 RNU1-129P-201ENST00000384064 167 ntBASIC14.96□□□□□ -0.01
CLOCKO15516 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLOCKO15516 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC14.96□□□□□ -0.01
CLOCKO15516 AC004832.2-201ENST00000426397 482 ntBASIC14.96□□□□□ -0.01
CLOCKO15516 MROH4P-201ENST00000431302 1578 ntBASIC14.96□□□□□ -0.01
CLOCKO15516 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLOCKO15516 KRT18P2-201ENST00000447938 1258 ntBASIC14.96□□□□□ -0.01
CLOCKO15516 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.96□□□□□ -0.01
CLOCKO15516 AC112482.1-201ENST00000492080 688 ntBASIC14.96□□□□□ -0.01
CLOCKO15516 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLOCKO15516 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
CLOCKO15516 MAL2-202ENST00000531508 892 ntTSL 3 BASIC14.96□□□□□ -0.01
CLOCKO15516 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
CLOCKO15516 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC14.96□□□□□ -0.01
CLOCKO15516 U1.21-201ENST00000580816 167 ntBASIC14.96□□□□□ -0.01
CLOCKO15516 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.96□□□□□ -0.01
CLOCKO15516 MTDHP5-201ENST00000598980 586 ntBASIC14.96□□□□□ -0.01
CLOCKO15516 FGD5P1-202ENST00000614866 2498 ntBASIC14.96□□□□□ -0.01
CLOCKO15516 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLOCKO15516 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
CLOCKO15516 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
CLOCKO15516 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
CLOCKO15516 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.96□□□□□ -0.02
CLOCKO15516 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC14.96□□□□□ -0.02
CLOCKO15516 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
CLOCKO15516 AC067750.1-201ENST00000608826 6545 ntBASIC14.96□□□□□ -0.02
CLOCKO15516 TKT-202ENST00000423516 2075 ntTSL 2 BASIC14.96□□□□□ -0.02
CLOCKO15516 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
CLOCKO15516 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC14.96□□□□□ -0.02
CLOCKO15516 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
CLOCKO15516 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLOCKO15516 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLOCKO15516 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLOCKO15516 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC14.95□□□□□ -0.02
CLOCKO15516 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC14.95□□□□□ -0.02
CLOCKO15516 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLOCKO15516 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLOCKO15516 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLOCKO15516 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLOCKO15516 WASH6P-202ENST00000359512 1437 ntBASIC14.95□□□□□ -0.02
CLOCKO15516 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CLOCKO15516 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CLOCKO15516 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLOCKO15516 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.95□□□□□ -0.02
CLOCKO15516 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLOCKO15516 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLOCKO15516 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CLOCKO15516 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CLOCKO15516 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLOCKO15516 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC14.95□□□□□ -0.02
CLOCKO15516 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.95□□□□□ -0.02
CLOCKO15516 OR7E47P-204ENST00000575924 449 ntBASIC14.95□□□□□ -0.02
CLOCKO15516 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC14.95□□□□□ -0.02
CLOCKO15516 AC079781.4-201ENST00000641908 219 ntBASIC14.95□□□□□ -0.02
CLOCKO15516 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC14.95□□□□□ -0.02
CLOCKO15516 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLOCKO15516 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLOCKO15516 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLOCKO15516 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
CLOCKO15516 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.95□□□□□ -0.02
CLOCKO15516 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CLOCKO15516 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.95□□□□□ -0.02
CLOCKO15516 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLOCKO15516 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLOCKO15516 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CLOCKO15516 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLOCKO15516 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLOCKO15516 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLOCKO15516 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CLOCKO15516 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC14.95□□□□□ -0.02
CLOCKO15516 AC134407.2-201ENST00000625089 1978 ntBASIC14.94□□□□□ -0.02
CLOCKO15516 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.94□□□□□ -0.02
CLOCKO15516 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CLOCKO15516 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLOCKO15516 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.94□□□□□ -0.02
CLOCKO15516 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLOCKO15516 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.94□□□□□ -0.02
CLOCKO15516 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
CLOCKO15516 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CLOCKO15516 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.94□□□□□ -0.02
CLOCKO15516 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC14.94□□□□□ -0.02
CLOCKO15516 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLOCKO15516 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLOCKO15516 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC14.94□□□□□ -0.02
CLOCKO15516 ATP6V0CP3-201ENST00000417255 467 ntBASIC14.94□□□□□ -0.02
CLOCKO15516 PRSS29P-201ENST00000440800 595 ntBASIC14.94□□□□□ -0.02
CLOCKO15516 AC092183.1-201ENST00000469884 875 ntBASIC14.94□□□□□ -0.02
CLOCKO15516 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC14.94□□□□□ -0.02
CLOCKO15516 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLOCKO15516 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC14.94□□□□□ -0.02
CLOCKO15516 MIR4515-201ENST00000584082 81 ntBASIC14.94□□□□□ -0.02
CLOCKO15516 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.94□□□□□ -0.02
CLOCKO15516 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC14.94□□□□□ -0.02
CLOCKO15516 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLOCKO15516 SLC39A1-204ENST00000368623 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLOCKO15516 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.94□□□□□ -0.02
CLOCKO15516 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLOCKO15516 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CLOCKO15516 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC14.94□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms