Protein–RNA interactions for Protein: O00291

HIP1, Huntingtin-interacting protein 1, humanhuman

Predictions only

Length 1,037 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIP1O00291 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIP1O00291 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIP1O00291 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIP1O00291 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC18.81■□□□□ 0.6
HIP1O00291 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIP1O00291 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.81■□□□□ 0.6
HIP1O00291 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC18.81■□□□□ 0.6
HIP1O00291 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIP1O00291 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIP1O00291 FTH1-202ENST00000526640 786 ntTSL 2 BASIC18.81■□□□□ 0.6
HIP1O00291 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIP1O00291 ARL16-202ENST00000570561 768 ntTSL 2 BASIC18.81■□□□□ 0.6
HIP1O00291 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC18.81■□□□□ 0.6
HIP1O00291 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC18.81■□□□□ 0.6
HIP1O00291 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIP1O00291 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HIP1O00291 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.81■□□□□ 0.6
HIP1O00291 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC18.81■□□□□ 0.6
HIP1O00291 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18.81■□□□□ 0.6
HIP1O00291 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIP1O00291 AL158212.4-201ENST00000624062 1286 ntBASIC18.81■□□□□ 0.6
HIP1O00291 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIP1O00291 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIP1O00291 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIP1O00291 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIP1O00291 HYMAI-201ENST00000635591 3347 ntBASIC18.81■□□□□ 0.6
HIP1O00291 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIP1O00291 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HIP1O00291 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HIP1O00291 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HIP1O00291 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HIP1O00291 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIP1O00291 ETV3-201ENST00000326786 1539 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIP1O00291 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC18.8■□□□□ 0.6
HIP1O00291 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC18.8■□□□□ 0.6
HIP1O00291 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIP1O00291 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIP1O00291 AC067930.6-201ENST00000623257 4947 ntBASIC18.8■□□□□ 0.6
HIP1O00291 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIP1O00291 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HIP1O00291 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.8■□□□□ 0.6
HIP1O00291 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.8■□□□□ 0.6
HIP1O00291 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HIP1O00291 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
HIP1O00291 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIP1O00291 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIP1O00291 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC18.8■□□□□ 0.6
HIP1O00291 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.8■□□□□ 0.6
HIP1O00291 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIP1O00291 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIP1O00291 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.8■□□□□ 0.6
HIP1O00291 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.8■□□□□ 0.6
HIP1O00291 AC025181.2-201ENST00000606994 802 ntBASIC18.8■□□□□ 0.6
HIP1O00291 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIP1O00291 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIP1O00291 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIP1O00291 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HIP1O00291 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIP1O00291 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIP1O00291 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
HIP1O00291 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HIP1O00291 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC18.8■□□□□ 0.6
HIP1O00291 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HIP1O00291 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIP1O00291 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIP1O00291 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
HIP1O00291 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIP1O00291 AC023024.2-201ENST00000623561 1993 ntBASIC18.79■□□□□ 0.6
HIP1O00291 POLL-217ENST00000628479 1953 ntTSL 5 BASIC18.79■□□□□ 0.6
HIP1O00291 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HIP1O00291 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIP1O00291 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.79■□□□□ 0.6
HIP1O00291 GHSR-202ENST00000427970 912 ntBASIC18.79■□□□□ 0.6
HIP1O00291 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.79■□□□□ 0.6
HIP1O00291 SPDYE18-201ENST00000510091 1050 ntBASIC18.79■□□□□ 0.6
HIP1O00291 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HIP1O00291 AC027796.2-201ENST00000575326 344 ntBASIC18.79■□□□□ 0.6
HIP1O00291 AL391069.4-201ENST00000609583 481 ntBASIC18.79■□□□□ 0.6
HIP1O00291 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC18.79■□□□□ 0.6
HIP1O00291 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
HIP1O00291 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIP1O00291 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
HIP1O00291 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIP1O00291 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIP1O00291 RERG-209ENST00000546331 1383 ntTSL 2 BASIC18.79■□□□□ 0.6
HIP1O00291 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.79■□□□□ 0.6
HIP1O00291 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIP1O00291 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
HIP1O00291 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
HIP1O00291 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIP1O00291 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.78■□□□□ 0.6
HIP1O00291 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIP1O00291 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIP1O00291 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIP1O00291 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC18.78■□□□□ 0.6
HIP1O00291 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
HIP1O00291 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
HIP1O00291 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
HIP1O00291 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.78■□□□□ 0.6
HIP1O00291 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms