Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 KRT18P64-201ENST00000434946 1219 ntBASIC11.16□□□□□ -0.62
LYRM9A8MSI8 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 POLD4-211ENST00000539074 714 ntTSL 3 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 AC023310.3-201ENST00000557027 670 ntBASIC11.16□□□□□ -0.62
LYRM9A8MSI8 AC100756.1-201ENST00000562736 682 ntBASIC11.16□□□□□ -0.62
LYRM9A8MSI8 AC138749.3-201ENST00000567691 622 ntBASIC11.16□□□□□ -0.62
LYRM9A8MSI8 COX11-202ENST00000571584 1108 ntTSL 2 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 MIR3197-201ENST00000582241 73 ntBASIC11.16□□□□□ -0.62
LYRM9A8MSI8 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 AC093726.1-201ENST00000608064 963 ntBASIC11.16□□□□□ -0.62
LYRM9A8MSI8 AC116165.1-201ENST00000611806 668 ntBASIC11.16□□□□□ -0.62
LYRM9A8MSI8 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
LYRM9A8MSI8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 FAM84A-201ENST00000295092 6355 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 AL365209.1-201ENST00000624418 6473 ntBASIC11.15□□□□□ -0.62
LYRM9A8MSI8 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 GOLGA6L11P-201ENST00000417252 1298 ntBASIC11.15□□□□□ -0.62
LYRM9A8MSI8 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 TMPRSS11CP-201ENST00000453277 683 ntBASIC11.15□□□□□ -0.62
LYRM9A8MSI8 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 AC140912.1-201ENST00000577171 1054 ntBASIC11.15□□□□□ -0.62
LYRM9A8MSI8 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
LYRM9A8MSI8 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms