Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
HFM1A2PYH4 AC022616.1-201ENST00000518688 554 ntBASIC22.75■■□□□ 1.23
HFM1A2PYH4 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC22.75■■□□□ 1.23
HFM1A2PYH4 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC22.75■■□□□ 1.23
HFM1A2PYH4 DUX4L45-201ENST00000566406 1057 ntBASIC22.75■■□□□ 1.23
HFM1A2PYH4 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HFM1A2PYH4 SLC5A10-202ENST00000395643 1982 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
HFM1A2PYH4 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC22.75■■□□□ 1.23
HFM1A2PYH4 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
HFM1A2PYH4 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC22.75■■□□□ 1.23
HFM1A2PYH4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HFM1A2PYH4 REXO1L5P-201ENST00000622260 2098 ntBASIC22.75■■□□□ 1.23
HFM1A2PYH4 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HFM1A2PYH4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC22.75■■□□□ 1.23
HFM1A2PYH4 LRRC59-203ENST00000576448 1531 ntBASIC22.75■■□□□ 1.23
HFM1A2PYH4 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC22.75■■□□□ 1.23
HFM1A2PYH4 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
HFM1A2PYH4 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC22.75■■□□□ 1.23
HFM1A2PYH4 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
HFM1A2PYH4 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC22.75■■□□□ 1.23
HFM1A2PYH4 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
HFM1A2PYH4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HFM1A2PYH4 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HFM1A2PYH4 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC22.75■■□□□ 1.23
HFM1A2PYH4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC22.75■■□□□ 1.23
HFM1A2PYH4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HFM1A2PYH4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC22.75■■□□□ 1.23
HFM1A2PYH4 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
HFM1A2PYH4 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC22.75■■□□□ 1.23
HFM1A2PYH4 AC055811.4-201ENST00000624039 1754 ntBASIC22.75■■□□□ 1.23
HFM1A2PYH4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
HFM1A2PYH4 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
HFM1A2PYH4 CD8B2-202ENST00000417670 633 ntBASIC22.74■■□□□ 1.23
HFM1A2PYH4 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC22.74■■□□□ 1.23
HFM1A2PYH4 OLR1-203ENST00000432556 950 ntTSL 2 BASIC22.74■■□□□ 1.23
HFM1A2PYH4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC22.74■■□□□ 1.23
HFM1A2PYH4 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
HFM1A2PYH4 RNA5SP486-201ENST00000515961 83 ntBASIC22.74■■□□□ 1.23
HFM1A2PYH4 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
HFM1A2PYH4 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC22.74■■□□□ 1.23
HFM1A2PYH4 MIR4525-201ENST00000580000 75 ntBASIC22.74■■□□□ 1.23
HFM1A2PYH4 AC004466.1-201ENST00000599515 1080 ntBASIC22.74■■□□□ 1.23
HFM1A2PYH4 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC22.74■■□□□ 1.23
HFM1A2PYH4 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
HFM1A2PYH4 AC132938.4-201ENST00000623835 848 ntBASIC22.74■■□□□ 1.23
HFM1A2PYH4 AC006453.4-201ENST00000636949 1252 ntBASIC22.74■■□□□ 1.23
HFM1A2PYH4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC22.74■■□□□ 1.23
HFM1A2PYH4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
HFM1A2PYH4 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
HFM1A2PYH4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC22.74■■□□□ 1.23
HFM1A2PYH4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC22.74■■□□□ 1.23
HFM1A2PYH4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
HFM1A2PYH4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
HFM1A2PYH4 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC22.74■■□□□ 1.23
HFM1A2PYH4 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC22.74■■□□□ 1.23
HFM1A2PYH4 AL359258.3-201ENST00000622910 2331 ntBASIC22.74■■□□□ 1.23
HFM1A2PYH4 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
HFM1A2PYH4 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
HFM1A2PYH4 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
HFM1A2PYH4 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC22.74■■□□□ 1.23
HFM1A2PYH4 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
HFM1A2PYH4 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
HFM1A2PYH4 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC22.74■■□□□ 1.23
HFM1A2PYH4 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
HFM1A2PYH4 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC22.74■■□□□ 1.23
HFM1A2PYH4 RNA5SP412-201ENST00000516234 123 ntBASIC22.74■■□□□ 1.23
HFM1A2PYH4 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC22.74■■□□□ 1.23
HFM1A2PYH4 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
HFM1A2PYH4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC22.74■■□□□ 1.23
HFM1A2PYH4 C2orf69P2-201ENST00000562032 1123 ntBASIC22.74■■□□□ 1.23
HFM1A2PYH4 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
HFM1A2PYH4 TECR-220ENST00000600083 1204 ntTSL 2 BASIC22.74■■□□□ 1.23
HFM1A2PYH4 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC22.73■■□□□ 1.23
HFM1A2PYH4 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC22.73■■□□□ 1.23
HFM1A2PYH4 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HFM1A2PYH4 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HFM1A2PYH4 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC22.73■■□□□ 1.23
HFM1A2PYH4 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC22.73■■□□□ 1.23
HFM1A2PYH4 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HFM1A2PYH4 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
HFM1A2PYH4 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
HFM1A2PYH4 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC22.73■■□□□ 1.23
HFM1A2PYH4 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
HFM1A2PYH4 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HFM1A2PYH4 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
HFM1A2PYH4 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
HFM1A2PYH4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC22.73■■□□□ 1.23
HFM1A2PYH4 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HFM1A2PYH4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC22.73■■□□□ 1.23
HFM1A2PYH4 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
HFM1A2PYH4 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
HFM1A2PYH4 AC245100.3-201ENST00000441281 285 ntBASIC22.73■■□□□ 1.23
HFM1A2PYH4 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
HFM1A2PYH4 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC22.73■■□□□ 1.23
HFM1A2PYH4 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HFM1A2PYH4 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC22.73■■□□□ 1.23
HFM1A2PYH4 AC079316.1-201ENST00000548397 411 ntBASIC22.73■■□□□ 1.23
HFM1A2PYH4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
HFM1A2PYH4 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
HFM1A2PYH4 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC22.73■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms