Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 AC069236.1-201ENST00000604339 616 ntBASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 TRMT2B-202ENST00000372936 3327 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 TGM7-201ENST00000452443 2313 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 ZNF646-202ENST00000394979 8118 ntAPPRIS ALT2 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 AC112176.1-201ENST00000565428 3024 ntBASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 EGFR-207ENST00000455089 3844 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 GOLGA6L4-202ENST00000422563 4155 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 SIGLEC12-201ENST00000291707 2121 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 PES1-204ENST00000402284 2144 ntTSL 5 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 EGFR-AS1-201ENST00000442411 2806 ntTSL 2 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 LINC01019-201ENST00000505443 3199 ntTSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 TLL2-201ENST00000357947 6756 ntAPPRIS P1 TSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC8.02□□□□□ -1.13
LINC01558Q9Y6Z2 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 AC022497.1-201ENST00000624916 3691 ntBASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 CEP85L-203ENST00000368491 7673 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 DOK4-210ENST00000566936 2851 ntTSL 3 BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 PTGR2-204ENST00000555228 2543 ntAPPRIS P1 TSL 5 BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 SCAF4-201ENST00000286835 4193 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 MIR9-3HG-201ENST00000536780 4778 ntTSL 3 BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 MKRN5P-201ENST00000445263 1467 ntBASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 GRAMD4-201ENST00000361034 4315 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 LINC00893-215ENST00000618757 2347 ntTSL 2 BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 LMBR1L-201ENST00000267102 2934 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 CEP126-201ENST00000263468 7039 ntAPPRIS P2 TSL 1 (best) BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 SETD4-207ENST00000399215 4272 ntAPPRIS P1 TSL 2 BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 INE2-201ENST00000630399 1874 ntBASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 COX5BP2-201ENST00000392354 334 ntBASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 AL645939.2-201ENST00000427340 991 ntBASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 AC109462.3-201ENST00000573934 613 ntBASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC8.01□□□□□ -1.13
LINC01558Q9Y6Z2 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC8.01□□□□□ -1.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms