Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 C9orf47-201ENST00000334490 4829 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
AP4S1Q9Y587 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 FAM185BP-201ENST00000443595 716 ntBASIC14.85□□□□□ -0.03
AP4S1Q9Y587 KRT18P31-201ENST00000506277 1292 ntBASIC14.85□□□□□ -0.03
AP4S1Q9Y587 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 ACE3P-201ENST00000423435 1973 ntBASIC14.85□□□□□ -0.03
AP4S1Q9Y587 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 AC073439.1-201ENST00000624121 1774 ntBASIC14.85□□□□□ -0.03
AP4S1Q9Y587 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 BNIP3P1-202ENST00000550043 1585 ntBASIC14.85□□□□□ -0.03
AP4S1Q9Y587 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
AP4S1Q9Y587 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 AL031432.2-201ENST00000566714 459 ntBASIC14.84□□□□□ -0.03
AP4S1Q9Y587 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 AL928711.1-201ENST00000570165 459 ntBASIC14.84□□□□□ -0.03
AP4S1Q9Y587 AC025062.2-201ENST00000605477 670 ntBASIC14.84□□□□□ -0.03
AP4S1Q9Y587 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP4S1Q9Y587 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
AP4S1Q9Y587 AL691432.1-201ENST00000596308 1422 ntBASIC14.83□□□□□ -0.03
AP4S1Q9Y587 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.83□□□□□ -0.03
AP4S1Q9Y587 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
AP4S1Q9Y587 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms