Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.22■□□□□ 0.19
YIPF1Q9Y548 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 AC006001.1-201ENST00000325130 474 ntBASIC16.21■□□□□ 0.19
YIPF1Q9Y548 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 DUX4L45-201ENST00000566406 1057 ntBASIC16.21■□□□□ 0.19
YIPF1Q9Y548 MIR6869-201ENST00000619434 62 ntBASIC16.21■□□□□ 0.19
YIPF1Q9Y548 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
YIPF1Q9Y548 PCDHB19P-201ENST00000570871 2371 ntBASIC16.21■□□□□ 0.19
YIPF1Q9Y548 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.18
YIPF1Q9Y548 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
YIPF1Q9Y548 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
YIPF1Q9Y548 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.21■□□□□ 0.18
YIPF1Q9Y548 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.21■□□□□ 0.18
YIPF1Q9Y548 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
YIPF1Q9Y548 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 AL118508.1-201ENST00000613502 2345 ntBASIC16.2■□□□□ 0.18
YIPF1Q9Y548 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 AC084018.2-201ENST00000613093 2607 ntBASIC16.2■□□□□ 0.18
YIPF1Q9Y548 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 NUS1P3-201ENST00000423502 862 ntBASIC16.2■□□□□ 0.18
YIPF1Q9Y548 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 RPL13AP20-201ENST00000459725 609 ntBASIC16.2■□□□□ 0.18
YIPF1Q9Y548 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 FAM8A2P-201ENST00000528813 1142 ntBASIC16.2■□□□□ 0.18
YIPF1Q9Y548 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 RAB40B-202ENST00000538809 704 ntTSL 2 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 AC023310.1-201ENST00000554836 735 ntBASIC16.2■□□□□ 0.18
YIPF1Q9Y548 DERL2-202ENST00000570848 657 ntTSL 5 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 AC148477.4-201ENST00000613430 1793 ntBASIC16.2■□□□□ 0.18
YIPF1Q9Y548 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
YIPF1Q9Y548 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.2■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms