Protein–RNA interactions for Protein: Q9UIW0

VAX2, Ventral anterior homeobox 2, humanhuman

Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAX2Q9UIW0 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC12.34□□□□□ -0.43
VAX2Q9UIW0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VAX2Q9UIW0 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VAX2Q9UIW0 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VAX2Q9UIW0 PI4KAP1-204ENST00000612579 1703 ntBASIC12.34□□□□□ -0.43
VAX2Q9UIW0 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
VAX2Q9UIW0 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
VAX2Q9UIW0 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
VAX2Q9UIW0 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
VAX2Q9UIW0 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.43
VAX2Q9UIW0 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 SPDYE13P-201ENST00000445314 798 ntBASIC12.33□□□□□ -0.44
VAX2Q9UIW0 ABCD1P5-201ENST00000445663 754 ntBASIC12.33□□□□□ -0.44
VAX2Q9UIW0 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 AP005901.3-202ENST00000581653 237 ntBASIC12.33□□□□□ -0.44
VAX2Q9UIW0 CLN6-214ENST00000636314 442 ntTSL 3 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.33□□□□□ -0.44
VAX2Q9UIW0 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.33□□□□□ -0.44
VAX2Q9UIW0 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC12.32□□□□□ -0.44
VAX2Q9UIW0 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
VAX2Q9UIW0 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
VAX2Q9UIW0 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VAX2Q9UIW0 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.32□□□□□ -0.44
VAX2Q9UIW0 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC12.32□□□□□ -0.44
VAX2Q9UIW0 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.32□□□□□ -0.44
VAX2Q9UIW0 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VAX2Q9UIW0 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC12.32□□□□□ -0.44
VAX2Q9UIW0 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC12.32□□□□□ -0.44
VAX2Q9UIW0 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAX2Q9UIW0 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VAX2Q9UIW0 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VAX2Q9UIW0 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAX2Q9UIW0 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAX2Q9UIW0 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.32□□□□□ -0.44
VAX2Q9UIW0 NIN-202ENST00000324330 4364 ntTSL 5 BASIC12.32□□□□□ -0.44
VAX2Q9UIW0 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
VAX2Q9UIW0 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.32□□□□□ -0.44
VAX2Q9UIW0 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAX2Q9UIW0 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAX2Q9UIW0 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
VAX2Q9UIW0 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
VAX2Q9UIW0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
VAX2Q9UIW0 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 2473.8 ms