Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC10.32□□□□□ -0.76
LINC00474Q9P2X8 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
LINC00474Q9P2X8 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00474Q9P2X8 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00474Q9P2X8 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
LINC00474Q9P2X8 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 AC092809.2-202ENST00000436706 790 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 AC026150.2-201ENST00000564693 1156 ntBASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 LITAF-210ENST00000571976 548 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 LITAF-214ENST00000574703 486 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 AC015911.4-201ENST00000588022 1070 ntBASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 AC006538.3-201ENST00000612495 578 ntBASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 AL359258.3-201ENST00000622910 2331 ntBASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
LINC00474Q9P2X8 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
LINC00474Q9P2X8 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC10.3□□□□□ -0.76
LINC00474Q9P2X8 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00474Q9P2X8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00474Q9P2X8 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00474Q9P2X8 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00474Q9P2X8 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC10.3□□□□□ -0.76
LINC00474Q9P2X8 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00474Q9P2X8 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00474Q9P2X8 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00474Q9P2X8 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00474Q9P2X8 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
LINC00474Q9P2X8 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC10.3□□□□□ -0.76
LINC00474Q9P2X8 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC10.3□□□□□ -0.76
LINC00474Q9P2X8 TNIK-204ENST00000436636 6970 ntAPPRIS P3 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00474Q9P2X8 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00474Q9P2X8 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00474Q9P2X8 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC10.3□□□□□ -0.76
LINC00474Q9P2X8 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC10.3□□□□□ -0.76
LINC00474Q9P2X8 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC10.3□□□□□ -0.76
LINC00474Q9P2X8 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC10.3□□□□□ -0.76
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms