Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HACD3Q9P035 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HACD3Q9P035 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HACD3Q9P035 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.89■□□□□ 0.13
HACD3Q9P035 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC15.89■□□□□ 0.13
HACD3Q9P035 AC055876.3-201ENST00000431496 288 ntBASIC15.89■□□□□ 0.13
HACD3Q9P035 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.89■□□□□ 0.13
HACD3Q9P035 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HACD3Q9P035 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC15.89■□□□□ 0.13
HACD3Q9P035 SDHAP3-202ENST00000515467 728 ntBASIC15.89■□□□□ 0.13
HACD3Q9P035 RFPL4AP1-201ENST00000530883 850 ntBASIC15.89■□□□□ 0.13
HACD3Q9P035 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HACD3Q9P035 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
HACD3Q9P035 AL512361.1-201ENST00000554200 418 ntBASIC15.89■□□□□ 0.13
HACD3Q9P035 AC010336.2-201ENST00000564226 506 ntBASIC15.89■□□□□ 0.13
HACD3Q9P035 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.89■□□□□ 0.13
HACD3Q9P035 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC15.89■□□□□ 0.13
HACD3Q9P035 AC025048.3-201ENST00000590609 569 ntBASIC15.89■□□□□ 0.13
HACD3Q9P035 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.89■□□□□ 0.13
HACD3Q9P035 AC138649.4-201ENST00000612222 287 ntBASIC15.89■□□□□ 0.13
HACD3Q9P035 AC106028.4-201ENST00000614509 607 ntBASIC15.89■□□□□ 0.13
HACD3Q9P035 AC093512.1-201ENST00000617969 520 ntBASIC15.89■□□□□ 0.13
HACD3Q9P035 AC005702.4-201ENST00000618393 416 ntBASIC15.89■□□□□ 0.13
HACD3Q9P035 AL590560.3-201ENST00000623350 461 ntBASIC15.89■□□□□ 0.13
HACD3Q9P035 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
HACD3Q9P035 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HACD3Q9P035 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HACD3Q9P035 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HACD3Q9P035 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.89■□□□□ 0.13
HACD3Q9P035 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.89■□□□□ 0.13
HACD3Q9P035 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
HACD3Q9P035 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HACD3Q9P035 Z97205.2-201ENST00000564697 1639 ntBASIC15.89■□□□□ 0.13
HACD3Q9P035 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HACD3Q9P035 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HACD3Q9P035 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HACD3Q9P035 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HACD3Q9P035 ILF3-AS1-201ENST00000591501 1983 ntBASIC15.89■□□□□ 0.13
HACD3Q9P035 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
HACD3Q9P035 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HACD3Q9P035 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HACD3Q9P035 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
HACD3Q9P035 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HACD3Q9P035 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HACD3Q9P035 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HACD3Q9P035 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HACD3Q9P035 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HACD3Q9P035 AL607033.1-201ENST00000623900 1599 ntBASIC15.88■□□□□ 0.13
HACD3Q9P035 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HACD3Q9P035 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
HACD3Q9P035 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC15.88■□□□□ 0.13
HACD3Q9P035 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HACD3Q9P035 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC15.88■□□□□ 0.13
HACD3Q9P035 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HACD3Q9P035 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
HACD3Q9P035 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HACD3Q9P035 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HACD3Q9P035 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HACD3Q9P035 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HACD3Q9P035 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC15.88■□□□□ 0.13
HACD3Q9P035 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.88■□□□□ 0.13
HACD3Q9P035 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC15.88■□□□□ 0.13
HACD3Q9P035 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.88■□□□□ 0.13
HACD3Q9P035 TARDBPP1-201ENST00000442013 1203 ntBASIC15.88■□□□□ 0.13
HACD3Q9P035 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC15.88■□□□□ 0.13
HACD3Q9P035 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
HACD3Q9P035 NME4-207ENST00000450036 985 ntTSL 3 BASIC15.88■□□□□ 0.13
HACD3Q9P035 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.88■□□□□ 0.13
HACD3Q9P035 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC15.88■□□□□ 0.13
HACD3Q9P035 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.88■□□□□ 0.13
HACD3Q9P035 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HACD3Q9P035 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC15.88■□□□□ 0.13
HACD3Q9P035 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.88■□□□□ 0.13
HACD3Q9P035 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
HACD3Q9P035 AC023157.3-201ENST00000619086 2088 ntBASIC15.88■□□□□ 0.13
HACD3Q9P035 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.88■□□□□ 0.13
HACD3Q9P035 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC15.88■□□□□ 0.13
HACD3Q9P035 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HACD3Q9P035 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
HACD3Q9P035 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HACD3Q9P035 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HACD3Q9P035 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
HACD3Q9P035 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.88■□□□□ 0.13
HACD3Q9P035 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.88■□□□□ 0.13
HACD3Q9P035 DHX36-213ENST00000496811 6733 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
HACD3Q9P035 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.88■□□□□ 0.13
HACD3Q9P035 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HACD3Q9P035 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HACD3Q9P035 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.87■□□□□ 0.13
HACD3Q9P035 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HACD3Q9P035 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HACD3Q9P035 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HACD3Q9P035 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC15.87■□□□□ 0.13
HACD3Q9P035 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HACD3Q9P035 TKT-202ENST00000423516 2075 ntTSL 2 BASIC15.87■□□□□ 0.13
HACD3Q9P035 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
HACD3Q9P035 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
HACD3Q9P035 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
HACD3Q9P035 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
HACD3Q9P035 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms