Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 AC114501.2-201ENST00000439631 535 ntBASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 RPL13P2-201ENST00000440687 659 ntBASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 AC135586.1-201ENST00000539323 574 ntBASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 AC004790.1-201ENST00000612686 536 ntBASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 AC007326.2-201ENST00000624224 7579 ntBASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
CUEDC1Q9NWM3 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 AC023824.1-201ENST00000562945 2975 ntBASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 FLJ16779-201ENST00000612722 7638 ntBASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 LOX-206ENST00000639739 1626 ntTSL 5 BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 AL589987.1-201ENST00000453380 819 ntBASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 SERBP1P5-201ENST00000510079 1181 ntBASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CUEDC1Q9NWM3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 AC127383.1-201ENST00000444697 1800 ntBASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 AC105250.1-201ENST00000509378 2057 ntBASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 BTBD7P1-201ENST00000447253 1453 ntBASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
CUEDC1Q9NWM3 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 77.1 ms