Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 NME2-201ENST00000393183 568 ntTSL 2 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 AC003958.1-201ENST00000435883 421 ntBASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 PGM5P2-202ENST00000637225 1043 ntBASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 AL139011.1-202ENST00000642063 584 ntBASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 CAPN5-201ENST00000278559 4397 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 HECW1-IT1-201ENST00000322220 1839 ntTSL 2 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 SEZ6L-201ENST00000248933 3248 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 SEZ6L-210ENST00000629590 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 ZCCHC9-201ENST00000254037 4606 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 DNM3-208ENST00000627582 7625 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 CHST15-201ENST00000346248 4810 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 CNTNAP3B-211ENST00000612828 7455 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 CUL5-201ENST00000393094 6351 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 MARCH3-201ENST00000308660 4196 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 MKRN5P-201ENST00000445263 1467 ntBASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 RCAN1-214ENST00000620920 2257 ntTSL 4 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 RNFT2-201ENST00000257575 3882 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 SLC7A1-201ENST00000380752 7347 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 GPR156-202ENST00000461057 2525 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 GOLGA3-202ENST00000450791 8870 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 SLC39A13-204ENST00000524928 3553 ntTSL 2 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 IKBKE-201ENST00000578328 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 ERCC5-201ENST00000355739 5082 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 ZIC3-201ENST00000287538 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 PER3-202ENST00000377532 6279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.86□□□□□ -1.15
CDC42SE1Q9NRR8 POLL-201ENST00000299206 2670 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 RAPGEF6-207ENST00000507093 5742 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 SLC5A9-203ENST00000438567 3195 ntAPPRIS P3 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 POLD1-205ENST00000595904 3402 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 GAS2L1P2-201ENST00000436355 1356 ntBASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 PCDHGA7-201ENST00000518325 4605 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 NDST1-201ENST00000261797 8030 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 ELMOD3-202ENST00000393852 2332 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 PRKAG3-203ENST00000439262 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 LINC00662-206ENST00000590523 2053 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 STAT6-202ENST00000454075 3037 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 CADM3-202ENST00000368125 3745 ntAPPRIS ALT2 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 RIC8A-203ENST00000526104 3703 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 TNRC18P1-201ENST00000502875 3650 ntBASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 SLC5A11-201ENST00000347898 2745 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 PLOD2-209ENST00000494950 2908 ntTSL 2 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 AC087164.2-201ENST00000624514 3130 ntBASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 TMEM63B-201ENST00000259746 3318 ntAPPRIS P1 TSL 2 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 SEPT6-205ENST00000394610 4694 ntAPPRIS ALT1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 LAMB1-203ENST00000393560 2806 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 ZNF398-201ENST00000426851 5268 ntTSL 1 (best) BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 FES-203ENST00000394302 2133 ntTSL 5 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 HSPA14-202ENST00000437161 1689 ntTSL 2 BASIC7.85□□□□□ -1.15
CDC42SE1Q9NRR8 TJP2-206ENST00000453658 4129 ntAPPRIS ALT2 TSL 2 BASIC7.85□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms