Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 TK1-203ENST00000588734 1681 ntTSL 2 BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
UBQLN4Q9NRR5 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 PPT1-215ENST00000641471 2368 ntBASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 KRT18P64-201ENST00000434946 1219 ntBASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 AC092337.1-201ENST00000568699 1129 ntBASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 AC004461.2-201ENST00000629517 803 ntBASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 AC138969.3-201ENST00000546612 1459 ntBASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 AC138932.2-201ENST00000548268 1459 ntBASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 AC126755.4-201ENST00000549796 1459 ntBASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 MLKL-201ENST00000306247 1781 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 STK33-217ENST00000534493 1895 ntTSL 2 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 LINC00554-201ENST00000564841 3011 ntBASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 BID-213ENST00000615414 2236 ntTSL 5 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
UBQLN4Q9NRR5 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 AC135586.1-201ENST00000539323 574 ntBASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 AC027796.2-201ENST00000575326 344 ntBASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 AC015910.1-201ENST00000579400 975 ntBASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
UBQLN4Q9NRR5 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms