Protein–RNA interactions for Protein: Q9NQC3

RTN4, Reticulon-4, humanhuman

Known RBP Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4Q9NQC3 TRIAP1-202ENST00000546954 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 RN7SL850P-201ENST00000579959 291 ntBASIC18.69■□□□□ 0.58
RTN4Q9NQC3 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
RTN4Q9NQC3 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 LSS-211ENST00000522411 2523 ntTSL 2 BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 DPP3-209ENST00000531863 2974 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 PCK2-216ENST00000561286 2012 ntTSL 2 BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 FXN-203ENST00000396366 922 ntTSL 2 BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 RCN1P1-201ENST00000400413 996 ntBASIC18.68■□□□□ 0.58
RTN4Q9NQC3 ACTG1P4-201ENST00000425123 1122 ntBASIC18.68■□□□□ 0.58
RTN4Q9NQC3 BX276092.5-203ENST00000456199 560 ntBASIC18.68■□□□□ 0.58
RTN4Q9NQC3 AC114982.2-201ENST00000461396 358 ntBASIC18.68■□□□□ 0.58
RTN4Q9NQC3 BLNK-209ENST00000495266 440 ntTSL 5 BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 AL121672.3-201ENST00000608644 468 ntBASIC18.68■□□□□ 0.58
RTN4Q9NQC3 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 AC134312.1-201ENST00000378417 3468 ntTSL 2 BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 FURIN-206ENST00000610579 4191 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 AC105206.1-202ENST00000314927 2368 ntBASIC18.68■□□□□ 0.58
RTN4Q9NQC3 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
RTN4Q9NQC3 AC233702.3-201ENST00000578656 1387 ntBASIC18.68■□□□□ 0.58
RTN4Q9NQC3 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 AL118505.1-201ENST00000619370 1932 ntBASIC18.67■□□□□ 0.58
RTN4Q9NQC3 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 AL023775.1-201ENST00000454907 1746 ntBASIC18.67■□□□□ 0.58
RTN4Q9NQC3 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 AC110015.1-201ENST00000423367 440 ntTSL 3 BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 AC073569.1-201ENST00000548469 667 ntTSL 2 BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC18.67■□□□□ 0.58
RTN4Q9NQC3 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 FGD5P1-202ENST00000614866 2498 ntBASIC18.67■□□□□ 0.58
RTN4Q9NQC3 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 ACADSB-202ENST00000368869 1599 ntTSL 2 BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 MPP4-207ENST00000428900 2320 ntTSL 2 BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 ADD2-202ENST00000355733 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
RTN4Q9NQC3 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 DNAJB5-210ENST00000545841 3068 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 LOXL4-201ENST00000260702 3653 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 RGS9-210ENST00000635833 2308 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
RTN4Q9NQC3 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms