Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 PENK-208ENST00000523051 772 ntTSL 5 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 AC112191.1-201ENST00000523689 701 ntBASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 MAL2-202ENST00000531508 892 ntTSL 3 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 Z83851.2-201ENST00000609564 659 ntBASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 STK4-AS1-201ENST00000434401 2065 ntTSL 2 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
COMMD4Q9H0A8 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC13.9□□□□□ -0.19
COMMD4Q9H0A8 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
COMMD4Q9H0A8 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
COMMD4Q9H0A8 HLA-A-201ENST00000376802 1334 ntBASIC13.9□□□□□ -0.19
COMMD4Q9H0A8 BSG-215ENST00000618006 1329 ntTSL 2 BASIC13.9□□□□□ -0.19
COMMD4Q9H0A8 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
COMMD4Q9H0A8 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
COMMD4Q9H0A8 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 CCDC74BP1-201ENST00000508880 1123 ntBASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 RNA5SP410-201ENST00000516285 106 ntBASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 RARRES2P8-201ENST00000566335 367 ntBASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 RER1-203ENST00000378513 3000 ntTSL 3 BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 AC023024.2-201ENST00000623561 1993 ntBASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 ZEB1-AS1-208ENST00000607166 2503 ntBASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
COMMD4Q9H0A8 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms