Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 STRC-213ENST00000541030 5305 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 ZMYM3-204ENST00000373982 1867 ntTSL 5 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 ZEB1-AS1-208ENST00000607166 2503 ntBASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 PARD6B-201ENST00000371610 4615 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 GID4-202ENST00000376345 1391 ntTSL 3 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 TMEM131L-203ENST00000409959 5017 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
LCE3DQ9BYE3 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 SH3BP2-203ENST00000442312 9211 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 ICA1-207ENST00000406470 2440 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 STK38L-201ENST00000389032 5068 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 AL353732.1-201ENST00000569618 1459 ntBASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 TP73-AS1-210ENST00000637775 1455 ntBASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 BEND3P1-201ENST00000421591 1944 ntBASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 PLB1-201ENST00000327757 5107 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 GRHL2-201ENST00000251808 5239 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 FGFR1-211ENST00000425967 5375 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 BAALC-201ENST00000297574 801 ntTSL 3 BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 CCS-201ENST00000310190 942 ntTSL 5 BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
LCE3DQ9BYE3 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms