Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP4Q9BWG4 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC11.94□□□□□ -0.5
SSBP4Q9BWG4 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP4Q9BWG4 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP4Q9BWG4 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP4Q9BWG4 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
SSBP4Q9BWG4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP4Q9BWG4 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC11.94□□□□□ -0.5
SSBP4Q9BWG4 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
SSBP4Q9BWG4 OS9-207ENST00000439210 1946 ntTSL 2 BASIC11.94□□□□□ -0.5
SSBP4Q9BWG4 AC011477.6-201ENST00000604980 1927 ntBASIC11.94□□□□□ -0.5
SSBP4Q9BWG4 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
SSBP4Q9BWG4 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 NME3-204ENST00000563498 920 ntTSL 2 BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 MTDHP3-201ENST00000594186 672 ntBASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 MTDHP4-201ENST00000600287 670 ntBASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 AL355877.3-201ENST00000622820 899 ntBASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 OS9-204ENST00000389146 2091 ntTSL 2 BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 CABLES2-201ENST00000279101 3785 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC11.93□□□□□ -0.5
SSBP4Q9BWG4 SLC9A3P3-201ENST00000457608 2229 ntBASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 PAN3-AS1-201ENST00000563843 1351 ntBASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 PNPLA6-202ENST00000414982 4522 ntTSL 2 BASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 AC006504.4-201ENST00000592118 1568 ntBASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 CICP20-201ENST00000443330 2801 ntBASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC11.92□□□□□ -0.5
SSBP4Q9BWG4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms