Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 AC138466.3-201ENST00000619983 221 ntBASIC16.05■□□□□ 0.16
CDCA3Q99618 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDCA3Q99618 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CDCA3Q99618 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDCA3Q99618 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDCA3Q99618 SP100-205ENST00000409824 1802 ntTSL 5 BASIC16.05■□□□□ 0.16
CDCA3Q99618 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CDCA3Q99618 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDCA3Q99618 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.05■□□□□ 0.16
CDCA3Q99618 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDCA3Q99618 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDCA3Q99618 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.05■□□□□ 0.16
CDCA3Q99618 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CDCA3Q99618 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDCA3Q99618 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.04■□□□□ 0.16
CDCA3Q99618 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.04■□□□□ 0.16
CDCA3Q99618 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDCA3Q99618 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.04■□□□□ 0.16
CDCA3Q99618 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDCA3Q99618 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.04■□□□□ 0.16
CDCA3Q99618 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CDCA3Q99618 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDCA3Q99618 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC16.04■□□□□ 0.16
CDCA3Q99618 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDCA3Q99618 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
CDCA3Q99618 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDCA3Q99618 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDCA3Q99618 DYDC1-201ENST00000372202 612 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
CDCA3Q99618 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDCA3Q99618 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDCA3Q99618 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CDCA3Q99618 TMEM177-203ENST00000409951 1216 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDCA3Q99618 AL596276.2-201ENST00000447525 331 ntBASIC16.04■□□□□ 0.16
CDCA3Q99618 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC16.04■□□□□ 0.16
CDCA3Q99618 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.04■□□□□ 0.16
CDCA3Q99618 MESTP3-201ENST00000503460 968 ntBASIC16.04■□□□□ 0.16
CDCA3Q99618 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC16.04■□□□□ 0.16
CDCA3Q99618 AC022188.1-201ENST00000620960 1664 ntBASIC16.04■□□□□ 0.16
CDCA3Q99618 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CDCA3Q99618 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDCA3Q99618 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDCA3Q99618 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CDCA3Q99618 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CDCA3Q99618 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDCA3Q99618 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDCA3Q99618 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CDCA3Q99618 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CDCA3Q99618 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDCA3Q99618 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDCA3Q99618 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDCA3Q99618 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDCA3Q99618 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC16.03■□□□□ 0.16
CDCA3Q99618 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CDCA3Q99618 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDCA3Q99618 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDCA3Q99618 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDCA3Q99618 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDCA3Q99618 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDCA3Q99618 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDCA3Q99618 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDCA3Q99618 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC16.03■□□□□ 0.16
CDCA3Q99618 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDCA3Q99618 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDCA3Q99618 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CDCA3Q99618 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDCA3Q99618 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC16.03■□□□□ 0.16
CDCA3Q99618 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.03■□□□□ 0.16
CDCA3Q99618 AC008267.1-201ENST00000474858 1069 ntBASIC16.03■□□□□ 0.16
CDCA3Q99618 AC018680.1-202ENST00000500324 525 ntTSL 3 BASIC16.03■□□□□ 0.16
CDCA3Q99618 MARK2P5-201ENST00000507649 634 ntBASIC16.03■□□□□ 0.16
CDCA3Q99618 MBP-227ENST00000526111 581 ntTSL 4 BASIC16.03■□□□□ 0.16
CDCA3Q99618 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.03■□□□□ 0.16
CDCA3Q99618 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.03■□□□□ 0.16
CDCA3Q99618 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.03■□□□□ 0.16
CDCA3Q99618 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC16.03■□□□□ 0.16
CDCA3Q99618 MIR5572-201ENST00000583188 137 ntBASIC16.03■□□□□ 0.16
CDCA3Q99618 CENPX-208ENST00000584347 799 ntTSL 2 BASIC16.03■□□□□ 0.16
CDCA3Q99618 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDCA3Q99618 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDCA3Q99618 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CDCA3Q99618 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDCA3Q99618 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.03■□□□□ 0.16
CDCA3Q99618 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.03■□□□□ 0.16
CDCA3Q99618 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
CDCA3Q99618 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.03■□□□□ 0.16
CDCA3Q99618 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDCA3Q99618 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.03■□□□□ 0.16
CDCA3Q99618 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CDCA3Q99618 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC16.03■□□□□ 0.16
CDCA3Q99618 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.03■□□□□ 0.16
CDCA3Q99618 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.03■□□□□ 0.16
CDCA3Q99618 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDCA3Q99618 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDCA3Q99618 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CDCA3Q99618 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDCA3Q99618 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CDCA3Q99618 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDCA3Q99618 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.02■□□□□ 0.16
CDCA3Q99618 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CDCA3Q99618 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms