Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC13.13□□□□□ -0.31
CCL13Q99616 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL13Q99616 SPDYE19P-201ENST00000338590 713 ntBASIC13.13□□□□□ -0.31
CCL13Q99616 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CCL13Q99616 AC236430.1-201ENST00000402231 743 ntBASIC13.13□□□□□ -0.31
CCL13Q99616 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL13Q99616 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 DOC2GP-202ENST00000514950 1163 ntBASIC13.13□□□□□ -0.31
CCL13Q99616 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC13.13□□□□□ -0.31
CCL13Q99616 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC13.13□□□□□ -0.31
CCL13Q99616 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.13□□□□□ -0.31
CCL13Q99616 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL13Q99616 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL13Q99616 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC13.13□□□□□ -0.31
CCL13Q99616 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
CCL13Q99616 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
CCL13Q99616 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC13.13□□□□□ -0.31
CCL13Q99616 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL13Q99616 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL13Q99616 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CCL13Q99616 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
CCL13Q99616 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL13Q99616 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
CCL13Q99616 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL13Q99616 DEK-201ENST00000244776 1441 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL13Q99616 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.13□□□□□ -0.31
CCL13Q99616 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL13Q99616 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC13.13□□□□□ -0.31
CCL13Q99616 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.13□□□□□ -0.31
CCL13Q99616 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
CCL13Q99616 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC13.13□□□□□ -0.31
CCL13Q99616 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
CCL13Q99616 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
CCL13Q99616 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC13.12□□□□□ -0.31
CCL13Q99616 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL13Q99616 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CCL13Q99616 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC13.12□□□□□ -0.31
CCL13Q99616 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 CD300A-205ENST00000577511 1459 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC13.12□□□□□ -0.31
CCL13Q99616 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.12□□□□□ -0.31
CCL13Q99616 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL13Q99616 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC13.12□□□□□ -0.31
CCL13Q99616 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
CCL13Q99616 ARHGEF7-214ENST00000478679 1833 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL13Q99616 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL13Q99616 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC13.12□□□□□ -0.31
CCL13Q99616 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 MIR661-201ENST00000384842 89 ntBASIC13.12□□□□□ -0.31
CCL13Q99616 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.12□□□□□ -0.31
CCL13Q99616 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL13Q99616 MEIS3P1-201ENST00000495167 958 ntBASIC13.12□□□□□ -0.31
CCL13Q99616 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC13.12□□□□□ -0.31
CCL13Q99616 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC13.12□□□□□ -0.31
CCL13Q99616 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.12□□□□□ -0.31
CCL13Q99616 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC13.12□□□□□ -0.31
CCL13Q99616 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.12□□□□□ -0.31
CCL13Q99616 RN7SL204P-201ENST00000582831 262 ntBASIC13.12□□□□□ -0.31
CCL13Q99616 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 LINC02560-201ENST00000596379 459 ntBASIC13.12□□□□□ -0.31
CCL13Q99616 AC092364.2-202ENST00000597012 1073 ntBASIC13.12□□□□□ -0.31
CCL13Q99616 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC13.12□□□□□ -0.31
CCL13Q99616 AC004233.3-201ENST00000607794 1269 ntBASIC13.12□□□□□ -0.31
CCL13Q99616 AC009118.2-201ENST00000613275 655 ntBASIC13.12□□□□□ -0.31
CCL13Q99616 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
CCL13Q99616 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC13.12□□□□□ -0.31
CCL13Q99616 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms