Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 KRT18P25-201ENST00000508931 1278 ntBASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 AC244250.3-201ENST00000620749 366 ntBASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 AC009090.5-201ENST00000624886 2285 ntBASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 TNRC18P3-201ENST00000441896 2691 ntBASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 NPTN-204ENST00000562924 1094 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 VCX3B-201ENST00000381029 756 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 Z97652.1-201ENST00000415176 329 ntTSL 5 BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 KRT18P43-201ENST00000469825 1281 ntBASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 C2orf69P1-201ENST00000563532 1093 ntBASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
CSMD1Q96PZ7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 AL357373.1-201ENST00000394974 322 ntBASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 RNF216P1-212ENST00000493407 659 ntTSL 3 BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 AC244157.2-201ENST00000616239 1006 ntBASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 DBET-201ENST00000630918 3363 ntBASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 AC104073.2-201ENST00000453737 312 ntBASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 MEG3_2.1-201ENST00000611456 105 ntBASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 AL162426.1-201ENST00000624141 743 ntBASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 CAP2P1-201ENST00000557743 1390 ntBASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 KRT8P4-201ENST00000509735 1454 ntBASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 PCGF3-213ENST00000620529 1899 ntBASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 RGS5-214ENST00000429865 754 ntTSL 3 BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
CSMD1Q96PZ7 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms