Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 AC138969.3-201ENST00000546612 1459 ntBASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 AC138932.2-201ENST00000548268 1459 ntBASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 AC126755.4-201ENST00000549796 1459 ntBASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 AC093214.1-201ENST00000511688 1107 ntBASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 AL596257.1-201ENST00000641463 2694 ntBASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CSPG4P5Q96PW8 MST1L-201ENST00000442552 2185 ntBASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 MRPS18AP1-201ENST00000414458 589 ntBASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 FAM8A3P-201ENST00000427218 844 ntBASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 BASP1P1-201ENST00000430708 665 ntBASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 STOM-203ENST00000538954 1257 ntTSL 5 BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 AC135586.1-201ENST00000539323 574 ntBASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 TIMM17BP1-201ENST00000545713 516 ntBASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CSPG4P5Q96PW8 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG4P5Q96PW8 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.1■□□□□ 0.17
CSPG4P5Q96PW8 CICP11-201ENST00000434745 2827 ntBASIC16.1■□□□□ 0.17
CSPG4P5Q96PW8 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CSPG4P5Q96PW8 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG4P5Q96PW8 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG4P5Q96PW8 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.1■□□□□ 0.17
CSPG4P5Q96PW8 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CSPG4P5Q96PW8 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG4P5Q96PW8 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG4P5Q96PW8 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG4P5Q96PW8 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG4P5Q96PW8 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG4P5Q96PW8 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC16.1■□□□□ 0.17
CSPG4P5Q96PW8 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.1■□□□□ 0.17
CSPG4P5Q96PW8 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CSPG4P5Q96PW8 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG4P5Q96PW8 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CSPG4P5Q96PW8 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.1■□□□□ 0.17
CSPG4P5Q96PW8 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.1■□□□□ 0.17
CSPG4P5Q96PW8 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC16.1■□□□□ 0.17
CSPG4P5Q96PW8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CSPG4P5Q96PW8 AL589987.1-201ENST00000453380 819 ntBASIC16.1■□□□□ 0.17
CSPG4P5Q96PW8 AL512638.1-201ENST00000457493 794 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms