Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC12.99□□□□□ -0.33
GAFA1Q96PS6 SLC7A15P-201ENST00000424028 1363 ntBASIC12.99□□□□□ -0.33
GAFA1Q96PS6 NFIC-211ENST00000641145 8399 ntBASIC12.99□□□□□ -0.33
GAFA1Q96PS6 AC068587.6-202ENST00000641839 5619 ntBASIC12.99□□□□□ -0.33
GAFA1Q96PS6 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 RPL5P21-201ENST00000404620 815 ntBASIC12.99□□□□□ -0.33
GAFA1Q96PS6 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 DFFBP1-201ENST00000433250 979 ntBASIC12.99□□□□□ -0.33
GAFA1Q96PS6 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 OARD1-208ENST00000469104 704 ntTSL 2 BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 TBCB-211ENST00000589996 724 ntTSL 3 BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 YTHDF3-AS1-201ENST00000603538 718 ntBASIC12.99□□□□□ -0.33
GAFA1Q96PS6 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 AC092384.3-202ENST00000564646 2873 ntBASIC12.99□□□□□ -0.33
GAFA1Q96PS6 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 C18orf15-201ENST00000623680 2534 ntBASIC12.99□□□□□ -0.33
GAFA1Q96PS6 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
GAFA1Q96PS6 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 DPEP1-201ENST00000261615 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 TLE3-202ENST00000440567 2657 ntTSL 2 BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 AC007541.1-201ENST00000570282 1469 ntBASIC12.98□□□□□ -0.33
GAFA1Q96PS6 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 GOLGA6L11P-201ENST00000417252 1298 ntBASIC12.98□□□□□ -0.33
GAFA1Q96PS6 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 AC092364.2-202ENST00000597012 1073 ntBASIC12.98□□□□□ -0.33
GAFA1Q96PS6 AC025181.2-201ENST00000606994 802 ntBASIC12.98□□□□□ -0.33
GAFA1Q96PS6 PDCD6-212ENST00000614778 1050 ntTSL 2 BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 POLL-217ENST00000628479 1953 ntTSL 5 BASIC12.98□□□□□ -0.33
GAFA1Q96PS6 FES-204ENST00000414248 2327 ntTSL 2 BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
GAFA1Q96PS6 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms