Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
COL21A1Q96P44 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
COL21A1Q96P44 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.86□□□□□ -0.03
COL21A1Q96P44 BNIP3P1-202ENST00000550043 1585 ntBASIC14.86□□□□□ -0.03
COL21A1Q96P44 AC090616.6-203ENST00000579186 1945 ntBASIC14.86□□□□□ -0.03
COL21A1Q96P44 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.86□□□□□ -0.03
COL21A1Q96P44 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC14.86□□□□□ -0.03
COL21A1Q96P44 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
COL21A1Q96P44 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.86□□□□□ -0.03
COL21A1Q96P44 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
COL21A1Q96P44 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 AL645939.2-201ENST00000427340 991 ntBASIC14.86□□□□□ -0.03
COL21A1Q96P44 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.86□□□□□ -0.03
COL21A1Q96P44 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.86□□□□□ -0.03
COL21A1Q96P44 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC14.86□□□□□ -0.03
COL21A1Q96P44 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC14.86□□□□□ -0.03
COL21A1Q96P44 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.86□□□□□ -0.03
COL21A1Q96P44 AC138035.3-201ENST00000622706 2791 ntBASIC14.86□□□□□ -0.03
COL21A1Q96P44 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.86□□□□□ -0.03
COL21A1Q96P44 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
COL21A1Q96P44 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
COL21A1Q96P44 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC14.86□□□□□ -0.03
COL21A1Q96P44 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL21A1Q96P44 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL21A1Q96P44 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
COL21A1Q96P44 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL21A1Q96P44 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 PCYOX1L-201ENST00000274569 2546 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL21A1Q96P44 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 PMS2P2-201ENST00000425039 1128 ntBASIC14.85□□□□□ -0.03
COL21A1Q96P44 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
COL21A1Q96P44 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 AC125807.1-201ENST00000483097 614 ntBASIC14.85□□□□□ -0.03
COL21A1Q96P44 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL21A1Q96P44 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
COL21A1Q96P44 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
COL21A1Q96P44 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 ILF3-AS1-201ENST00000591501 1983 ntBASIC14.85□□□□□ -0.03
COL21A1Q96P44 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL21A1Q96P44 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
COL21A1Q96P44 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
COL21A1Q96P44 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL21A1Q96P44 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
COL21A1Q96P44 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
COL21A1Q96P44 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL21A1Q96P44 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
COL21A1Q96P44 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL21A1Q96P44 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
COL21A1Q96P44 GRAMD4P3-201ENST00000621665 1669 ntBASIC14.84□□□□□ -0.03
COL21A1Q96P44 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
COL21A1Q96P44 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL21A1Q96P44 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
COL21A1Q96P44 TPO-203ENST00000346956 2923 ntTSL 5 BASIC14.84□□□□□ -0.03
COL21A1Q96P44 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms