Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 VMA21-202ENST00000370361 693 ntTSL 5 BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 TREML5P-201ENST00000421694 576 ntBASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 AC241585.1-201ENST00000433527 519 ntBASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
PDLIM5Q96HC4 POR-201ENST00000394893 2532 ntTSL 5 BASIC15.27■□□□□ 0.03
PDLIM5Q96HC4 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.27■□□□□ 0.03
PDLIM5Q96HC4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
PDLIM5Q96HC4 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PDLIM5Q96HC4 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PDLIM5Q96HC4 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PDLIM5Q96HC4 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PDLIM5Q96HC4 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
PDLIM5Q96HC4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
PDLIM5Q96HC4 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.27■□□□□ 0.03
PDLIM5Q96HC4 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
PDLIM5Q96HC4 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
PDLIM5Q96HC4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC15.27■□□□□ 0.03
PDLIM5Q96HC4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 MIR943-201ENST00000401286 94 ntBASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 PON3-203ENST00000427422 894 ntTSL 3 BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 AC025181.2-201ENST00000606994 802 ntBASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 BTD-207ENST00000449107 1820 ntAPPRIS P4 TSL 2 BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
PDLIM5Q96HC4 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 CICP11-201ENST00000434745 2827 ntBASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
PDLIM5Q96HC4 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms