Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDCA5Q96FF9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.02■□□□□ 0.48
CDCA5Q96FF9 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC18.02■□□□□ 0.48
CDCA5Q96FF9 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.02■□□□□ 0.48
CDCA5Q96FF9 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC18.02■□□□□ 0.48
CDCA5Q96FF9 AC125604.1-201ENST00000496255 707 ntBASIC18.02■□□□□ 0.48
CDCA5Q96FF9 AC019193.1-201ENST00000506678 823 ntBASIC18.02■□□□□ 0.48
CDCA5Q96FF9 IGLV3-15-201ENST00000518356 244 ntBASIC18.02■□□□□ 0.48
CDCA5Q96FF9 ANKRD11-208ENST00000563291 593 ntTSL 5 BASIC18.02■□□□□ 0.48
CDCA5Q96FF9 AC012044.1-201ENST00000603431 297 ntBASIC18.02■□□□□ 0.48
CDCA5Q96FF9 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC18.02■□□□□ 0.48
CDCA5Q96FF9 AL031665.1-201ENST00000619766 572 ntTSL 4 BASIC18.02■□□□□ 0.48
CDCA5Q96FF9 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CDCA5Q96FF9 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDCA5Q96FF9 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.02■□□□□ 0.48
CDCA5Q96FF9 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDCA5Q96FF9 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CDCA5Q96FF9 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDCA5Q96FF9 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CDCA5Q96FF9 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDCA5Q96FF9 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDCA5Q96FF9 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CDCA5Q96FF9 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 CLUHP2-201ENST00000426660 1303 ntBASIC18.01■□□□□ 0.47
CDCA5Q96FF9 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 PDIA3P2-201ENST00000428073 158 ntBASIC18.01■□□□□ 0.47
CDCA5Q96FF9 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 AC098935.1-201ENST00000446057 611 ntBASIC18.01■□□□□ 0.47
CDCA5Q96FF9 KLK11-204ENST00000453757 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 RN7SL181P-201ENST00000462921 277 ntBASIC18.01■□□□□ 0.47
CDCA5Q96FF9 SZRD1-203ENST00000471507 892 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 RTN3P1-201ENST00000536295 711 ntBASIC18.01■□□□□ 0.47
CDCA5Q96FF9 NPM1P43-201ENST00000558669 786 ntBASIC18.01■□□□□ 0.47
CDCA5Q96FF9 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 MIR4783-201ENST00000580343 82 ntBASIC18.01■□□□□ 0.47
CDCA5Q96FF9 AL162426.1-201ENST00000624141 743 ntBASIC18.01■□□□□ 0.47
CDCA5Q96FF9 CDK7-214ENST00000626796 358 ntTSL 5 BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 PCBP2-OT1-201ENST00000634357 590 ntBASIC18.01■□□□□ 0.47
CDCA5Q96FF9 AC006453.1-201ENST00000636037 1257 ntBASIC18.01■□□□□ 0.47
CDCA5Q96FF9 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.01■□□□□ 0.47
CDCA5Q96FF9 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDCA5Q96FF9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
CDCA5Q96FF9 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CDCA5Q96FF9 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDCA5Q96FF9 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CDCA5Q96FF9 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18■□□□□ 0.47
CDCA5Q96FF9 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18■□□□□ 0.47
CDCA5Q96FF9 RHOXF1-201ENST00000217999 769 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDCA5Q96FF9 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDCA5Q96FF9 CST9L-201ENST00000376979 959 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDCA5Q96FF9 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC18■□□□□ 0.47
CDCA5Q96FF9 NOC2LP1-201ENST00000450578 752 ntBASIC18■□□□□ 0.47
CDCA5Q96FF9 AL353637.1-201ENST00000451571 732 ntBASIC18■□□□□ 0.47
CDCA5Q96FF9 RN7SL818P-201ENST00000485099 259 ntBASIC18■□□□□ 0.47
CDCA5Q96FF9 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
CDCA5Q96FF9 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC18■□□□□ 0.47
CDCA5Q96FF9 AC005324.6-201ENST00000587972 613 ntBASIC18■□□□□ 0.47
CDCA5Q96FF9 WDR7-208ENST00000589935 544 ntTSL 4 BASIC18■□□□□ 0.47
CDCA5Q96FF9 AC004466.1-201ENST00000599515 1080 ntBASIC18■□□□□ 0.47
CDCA5Q96FF9 RN7SL725P-201ENST00000606439 259 ntBASIC18■□□□□ 0.47
CDCA5Q96FF9 AC090164.2-201ENST00000611487 516 ntBASIC18■□□□□ 0.47
CDCA5Q96FF9 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC18■□□□□ 0.47
CDCA5Q96FF9 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC18■□□□□ 0.47
CDCA5Q96FF9 COX6A1P2-201ENST00000620597 330 ntBASIC18■□□□□ 0.47
CDCA5Q96FF9 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CDCA5Q96FF9 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC18■□□□□ 0.47
CDCA5Q96FF9 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDCA5Q96FF9 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDCA5Q96FF9 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
CDCA5Q96FF9 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDCA5Q96FF9 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC18■□□□□ 0.47
CDCA5Q96FF9 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms