Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM11Q96F44 LINC00628-201ENST00000628516 1289 ntBASIC16.58■□□□□ 0.24
TRIM11Q96F44 AL033527.5-202ENST00000641632 1098 ntBASIC16.58■□□□□ 0.24
TRIM11Q96F44 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM11Q96F44 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM11Q96F44 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.58■□□□□ 0.24
TRIM11Q96F44 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM11Q96F44 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM11Q96F44 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM11Q96F44 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM11Q96F44 POLL-217ENST00000628479 1953 ntTSL 5 BASIC16.58■□□□□ 0.24
TRIM11Q96F44 AC126755.1-201ENST00000525846 6405 ntBASIC16.58■□□□□ 0.24
TRIM11Q96F44 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM11Q96F44 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM11Q96F44 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.58■□□□□ 0.24
TRIM11Q96F44 TNRC18P2-201ENST00000417666 2714 ntBASIC16.58■□□□□ 0.24
TRIM11Q96F44 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM11Q96F44 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM11Q96F44 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TRIM11Q96F44 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TRIM11Q96F44 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM11Q96F44 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM11Q96F44 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM11Q96F44 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRIM11Q96F44 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM11Q96F44 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM11Q96F44 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRIM11Q96F44 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM11Q96F44 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM11Q96F44 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM11Q96F44 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM11Q96F44 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRIM11Q96F44 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM11Q96F44 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRIM11Q96F44 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM11Q96F44 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM11Q96F44 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM11Q96F44 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM11Q96F44 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM11Q96F44 FO538757.1-201ENST00000623083 1397 ntBASIC16.57■□□□□ 0.24
TRIM11Q96F44 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM11Q96F44 EBI3-201ENST00000221847 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM11Q96F44 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM11Q96F44 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRIM11Q96F44 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRIM11Q96F44 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.57■□□□□ 0.24
TRIM11Q96F44 CNN2P2-201ENST00000443536 909 ntBASIC16.57■□□□□ 0.24
TRIM11Q96F44 CNN2P3-201ENST00000450201 906 ntBASIC16.57■□□□□ 0.24
TRIM11Q96F44 HLA-J-203ENST00000494367 1087 ntBASIC16.57■□□□□ 0.24
TRIM11Q96F44 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM11Q96F44 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM11Q96F44 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.57■□□□□ 0.24
TRIM11Q96F44 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM11Q96F44 AC027612.4-201ENST00000605371 583 ntBASIC16.57■□□□□ 0.24
TRIM11Q96F44 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.57■□□□□ 0.24
TRIM11Q96F44 AL136317.3-201ENST00000618497 906 ntBASIC16.57■□□□□ 0.24
TRIM11Q96F44 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC16.57■□□□□ 0.24
TRIM11Q96F44 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM11Q96F44 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
TRIM11Q96F44 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TRIM11Q96F44 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
TRIM11Q96F44 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TRIM11Q96F44 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM11Q96F44 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TRIM11Q96F44 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
TRIM11Q96F44 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM11Q96F44 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM11Q96F44 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM11Q96F44 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TRIM11Q96F44 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM11Q96F44 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM11Q96F44 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM11Q96F44 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM11Q96F44 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TRIM11Q96F44 ZNF586-203ENST00000396154 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM11Q96F44 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM11Q96F44 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM11Q96F44 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM11Q96F44 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
TRIM11Q96F44 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM11Q96F44 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM11Q96F44 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC16.56■□□□□ 0.24
TRIM11Q96F44 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.56■□□□□ 0.24
TRIM11Q96F44 AC079781.4-201ENST00000641908 219 ntBASIC16.56■□□□□ 0.24
TRIM11Q96F44 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM11Q96F44 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM11Q96F44 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM11Q96F44 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM11Q96F44 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM11Q96F44 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM11Q96F44 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.56■□□□□ 0.24
TRIM11Q96F44 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM11Q96F44 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM11Q96F44 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM11Q96F44 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TRIM11Q96F44 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
TRIM11Q96F44 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TRIM11Q96F44 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC16.55■□□□□ 0.24
TRIM11Q96F44 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TRIM11Q96F44 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms