Protein–RNA interactions for Protein: Q96EX2

RNFT2, RING finger and transmembrane domain-containing protein 2, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNFT2Q96EX2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNFT2Q96EX2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
RNFT2Q96EX2 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNFT2Q96EX2 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RNFT2Q96EX2 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RNFT2Q96EX2 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RNFT2Q96EX2 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
RNFT2Q96EX2 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.27□□□□□ -0.12
RNFT2Q96EX2 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.27□□□□□ -0.12
RNFT2Q96EX2 MED22-202ENST00000371999 987 ntTSL 3 BASIC14.27□□□□□ -0.13
RNFT2Q96EX2 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNFT2Q96EX2 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.27□□□□□ -0.13
RNFT2Q96EX2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC14.27□□□□□ -0.13
RNFT2Q96EX2 AC108751.1-201ENST00000490852 363 ntBASIC14.27□□□□□ -0.13
RNFT2Q96EX2 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC14.27□□□□□ -0.13
RNFT2Q96EX2 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC14.27□□□□□ -0.13
RNFT2Q96EX2 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC14.27□□□□□ -0.13
RNFT2Q96EX2 TP73-AS1-207ENST00000624167 988 ntBASIC14.27□□□□□ -0.13
RNFT2Q96EX2 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RNFT2Q96EX2 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNFT2Q96EX2 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNFT2Q96EX2 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
RNFT2Q96EX2 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNFT2Q96EX2 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
RNFT2Q96EX2 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNFT2Q96EX2 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNFT2Q96EX2 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNFT2Q96EX2 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNFT2Q96EX2 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNFT2Q96EX2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RNFT2Q96EX2 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNFT2Q96EX2 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RNFT2Q96EX2 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RNFT2Q96EX2 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.27□□□□□ -0.13
RNFT2Q96EX2 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 BNIP3P1-202ENST00000550043 1585 ntBASIC14.26□□□□□ -0.13
RNFT2Q96EX2 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 RPS2P28-201ENST00000314255 741 ntBASIC14.26□□□□□ -0.13
RNFT2Q96EX2 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 UPK3BP1-201ENST00000428678 509 ntBASIC14.26□□□□□ -0.13
RNFT2Q96EX2 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
RNFT2Q96EX2 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RNFT2Q96EX2 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNFT2Q96EX2 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNFT2Q96EX2 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNFT2Q96EX2 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC14.25□□□□□ -0.13
RNFT2Q96EX2 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNFT2Q96EX2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RNFT2Q96EX2 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.25□□□□□ -0.13
RNFT2Q96EX2 AL691432.1-201ENST00000596308 1422 ntBASIC14.25□□□□□ -0.13
RNFT2Q96EX2 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RNFT2Q96EX2 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNFT2Q96EX2 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNFT2Q96EX2 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNFT2Q96EX2 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNFT2Q96EX2 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
RNFT2Q96EX2 ARHGEF7-201ENST00000218789 5233 ntTSL 5 BASIC14.25□□□□□ -0.13
RNFT2Q96EX2 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNFT2Q96EX2 TET3-201ENST00000305799 5174 ntTSL 5 BASIC14.25□□□□□ -0.13
RNFT2Q96EX2 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
RNFT2Q96EX2 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
RNFT2Q96EX2 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC14.25□□□□□ -0.13
RNFT2Q96EX2 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms