Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.48□□□□□ -0.09
HPS1Q92902 AC211476.1-201ENST00000503899 468 ntBASIC14.48□□□□□ -0.09
HPS1Q92902 AC005829.1-201ENST00000570002 483 ntBASIC14.48□□□□□ -0.09
HPS1Q92902 AC134684.3-201ENST00000641758 218 ntBASIC14.48□□□□□ -0.09
HPS1Q92902 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HPS1Q92902 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.48□□□□□ -0.09
HPS1Q92902 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC14.48□□□□□ -0.09
HPS1Q92902 AL356585.2-201ENST00000625078 2396 ntBASIC14.48□□□□□ -0.09
HPS1Q92902 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.48□□□□□ -0.09
HPS1Q92902 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HPS1Q92902 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
HPS1Q92902 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
HPS1Q92902 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
HPS1Q92902 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC14.47□□□□□ -0.09
HPS1Q92902 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
HPS1Q92902 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HPS1Q92902 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HPS1Q92902 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HPS1Q92902 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HPS1Q92902 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HPS1Q92902 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC14.47□□□□□ -0.09
HPS1Q92902 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HPS1Q92902 RUNX3-203ENST00000399916 4340 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
HPS1Q92902 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
HPS1Q92902 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
HPS1Q92902 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
HPS1Q92902 OS9-204ENST00000389146 2091 ntTSL 2 BASIC14.47□□□□□ -0.09
HPS1Q92902 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.47□□□□□ -0.09
HPS1Q92902 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HPS1Q92902 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HPS1Q92902 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC14.47□□□□□ -0.09
HPS1Q92902 AC016027.1-202ENST00000607927 1699 ntBASIC14.47□□□□□ -0.09
HPS1Q92902 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.47□□□□□ -0.09
HPS1Q92902 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HPS1Q92902 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HPS1Q92902 Z97985.1-201ENST00000332270 946 ntBASIC14.47□□□□□ -0.09
HPS1Q92902 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
HPS1Q92902 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
HPS1Q92902 GGCT-205ENST00000409436 954 ntTSL 3 BASIC14.47□□□□□ -0.09
HPS1Q92902 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC14.47□□□□□ -0.09
HPS1Q92902 AP006288.1-201ENST00000446065 395 ntBASIC14.47□□□□□ -0.09
HPS1Q92902 GOSR1-204ENST00000451249 1231 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
HPS1Q92902 AC108073.2-201ENST00000464002 357 ntBASIC14.47□□□□□ -0.09
HPS1Q92902 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
HPS1Q92902 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC14.47□□□□□ -0.09
HPS1Q92902 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HPS1Q92902 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC14.47□□□□□ -0.09
HPS1Q92902 AC010654.1-201ENST00000615722 808 ntBASIC14.47□□□□□ -0.09
HPS1Q92902 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HPS1Q92902 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
HPS1Q92902 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HPS1Q92902 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.47□□□□□ -0.09
HPS1Q92902 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC14.47□□□□□ -0.09
HPS1Q92902 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
HPS1Q92902 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HPS1Q92902 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.47□□□□□ -0.09
HPS1Q92902 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HPS1Q92902 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
HPS1Q92902 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC14.47□□□□□ -0.09
HPS1Q92902 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.47□□□□□ -0.09
HPS1Q92902 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.47□□□□□ -0.09
HPS1Q92902 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
HPS1Q92902 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC14.47□□□□□ -0.09
HPS1Q92902 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
HPS1Q92902 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC14.47□□□□□ -0.09
HPS1Q92902 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
HPS1Q92902 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HPS1Q92902 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HPS1Q92902 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HPS1Q92902 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HPS1Q92902 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HPS1Q92902 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HPS1Q92902 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HPS1Q92902 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC14.46□□□□□ -0.09
HPS1Q92902 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HPS1Q92902 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HPS1Q92902 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.46□□□□□ -0.09
HPS1Q92902 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HPS1Q92902 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
HPS1Q92902 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC14.46□□□□□ -0.09
HPS1Q92902 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC14.46□□□□□ -0.09
HPS1Q92902 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HPS1Q92902 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HPS1Q92902 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HPS1Q92902 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC14.46□□□□□ -0.09
HPS1Q92902 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HPS1Q92902 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HPS1Q92902 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
HPS1Q92902 MRPL20P1-201ENST00000400819 433 ntBASIC14.46□□□□□ -0.09
HPS1Q92902 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
HPS1Q92902 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC14.46□□□□□ -0.09
HPS1Q92902 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HPS1Q92902 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC14.46□□□□□ -0.09
HPS1Q92902 HCG4B-203ENST00000450128 991 ntBASIC14.46□□□□□ -0.09
HPS1Q92902 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC14.46□□□□□ -0.09
HPS1Q92902 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.46□□□□□ -0.09
HPS1Q92902 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
HPS1Q92902 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
HPS1Q92902 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
HPS1Q92902 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.46□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms