Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.34■□□□□ 0.05
ATL1Q8WXF7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.34■□□□□ 0.05
ATL1Q8WXF7 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
ATL1Q8WXF7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC15.34■□□□□ 0.05
ATL1Q8WXF7 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC15.34■□□□□ 0.05
ATL1Q8WXF7 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC15.34■□□□□ 0.05
ATL1Q8WXF7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC15.34■□□□□ 0.05
ATL1Q8WXF7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATL1Q8WXF7 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.34■□□□□ 0.05
ATL1Q8WXF7 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
ATL1Q8WXF7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
ATL1Q8WXF7 AMT-233ENST00000636522 1620 ntTSL 2 BASIC15.34■□□□□ 0.05
ATL1Q8WXF7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.34■□□□□ 0.05
ATL1Q8WXF7 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATL1Q8WXF7 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC15.34■□□□□ 0.05
ATL1Q8WXF7 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATL1Q8WXF7 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATL1Q8WXF7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.34■□□□□ 0.05
ATL1Q8WXF7 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC15.34■□□□□ 0.05
ATL1Q8WXF7 PCDHA3-202ENST00000532566 4594 ntBASIC15.34■□□□□ 0.05
ATL1Q8WXF7 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC15.34■□□□□ 0.05
ATL1Q8WXF7 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ATL1Q8WXF7 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ATL1Q8WXF7 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.33■□□□□ 0.05
ATL1Q8WXF7 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ATL1Q8WXF7 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
ATL1Q8WXF7 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ATL1Q8WXF7 SCRN1-205ENST00000425819 1552 ntTSL 2 BASIC15.33■□□□□ 0.05
ATL1Q8WXF7 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 Z97205.2-201ENST00000564697 1639 ntBASIC15.33■□□□□ 0.04
ATL1Q8WXF7 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 LBH-203ENST00000404397 543 ntTSL 4 BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 CENPT-235ENST00000626059 1737 ntTSL 5 BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 TMED1-201ENST00000214869 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ATL1Q8WXF7 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 CENPM-205ENST00000404067 905 ntTSL 3 BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 CENPM-206ENST00000407253 818 ntTSL 2 BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 SLED1-202ENST00000512051 380 ntBASIC15.32■□□□□ 0.04
ATL1Q8WXF7 SDHAP3-202ENST00000515467 728 ntBASIC15.32■□□□□ 0.04
ATL1Q8WXF7 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
ATL1Q8WXF7 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms