Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 AC018892.3-201ENST00000623986 2499 ntBASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
SHKBP1Q8TBC3 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 RAPSN-202ENST00000352508 1452 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 AC010491.1-201ENST00000563101 2797 ntBASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 REXO1L6P-201ENST00000603433 1515 ntBASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 CCDC107-204ENST00000378409 1173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 RPL28-203ENST00000428193 573 ntTSL 2 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 AC068587.3-201ENST00000526613 355 ntBASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 RPL28-207ENST00000558815 616 ntTSL 2 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 CLUHP6-201ENST00000580789 941 ntBASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 AL022328.1-201ENST00000610050 478 ntBASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 PFAS-212ENST00000625942 396 ntTSL 5 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 AC093525.8-201ENST00000624099 1342 ntBASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SHKBP1Q8TBC3 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 AL121723.1-201ENST00000445194 1519 ntBASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 AC126177.1-201ENST00000547829 2218 ntBASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 KLF2P4-201ENST00000451959 1225 ntBASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 AP001889.1-201ENST00000525414 633 ntBASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 PTP4A1P2-201ENST00000546033 454 ntBASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 AC000095.1-201ENST00000603208 874 ntBASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SHKBP1Q8TBC3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms