Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 HBB-201ENST00000335295 628 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 RNA5SP359-201ENST00000364838 113 ntBASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 BCAS2P2-201ENST00000425064 674 ntBASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 AL365436.2-201ENST00000434112 526 ntTSL 4 BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 ALG3P1-201ENST00000508806 1114 ntBASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 AC008825.2-201ENST00000603374 718 ntBASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC20.22■□□□□ 0.83
COL22A1Q8NFW1 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 HIST2H2BA-201ENST00000412169 381 ntBASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 MIR3188-201ENST00000583494 85 ntBASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 CDC45-202ENST00000404724 1693 ntTSL 2 BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 AC015909.3-201ENST00000572855 1794 ntBASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 TKT-202ENST00000423516 2075 ntTSL 2 BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 AC136759.1-202ENST00000530858 2194 ntBASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
COL22A1Q8NFW1 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC20.2■□□□□ 0.83
COL22A1Q8NFW1 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 AC012158.2-201ENST00000536546 354 ntBASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 AC093752.3-201ENST00000567343 901 ntBASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 AC069224.1-201ENST00000566372 1715 ntBASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 PPP1R1B-202ENST00000394265 1419 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 TMEM208-201ENST00000304800 793 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 NHP2-202ENST00000314397 599 ntTSL 2 BASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 MBP-201ENST00000354542 575 ntTSL 2 BASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 NACA-202ENST00000393891 1059 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
COL22A1Q8NFW1 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
COL22A1Q8NFW1 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC20.19■□□□□ 0.82
COL22A1Q8NFW1 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
COL22A1Q8NFW1 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
COL22A1Q8NFW1 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms