Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 GPX1P2-201ENST00000429271 606 ntBASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 AL591424.1-201ENST00000442569 1213 ntBASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 KRT18P2-201ENST00000447938 1258 ntBASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 AP002472.1-201ENST00000577490 586 ntBASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 AC073389.1-201ENST00000595595 795 ntBASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
DNAAF1Q8NEP3 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 ZNF259P1-201ENST00000407656 1365 ntBASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
DNAAF1Q8NEP3 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
DNAAF1Q8NEP3 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms