Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC16.6■□□□□ 0.25
TMEM35BQ8NCS4 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.6■□□□□ 0.25
TMEM35BQ8NCS4 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
TMEM35BQ8NCS4 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM35BQ8NCS4 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM35BQ8NCS4 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM35BQ8NCS4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
TMEM35BQ8NCS4 AC023157.3-201ENST00000619086 2088 ntBASIC16.6■□□□□ 0.25
TMEM35BQ8NCS4 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM35BQ8NCS4 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.6■□□□□ 0.25
TMEM35BQ8NCS4 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
TMEM35BQ8NCS4 AC006486.2-201ENST00000624246 2199 ntBASIC16.6■□□□□ 0.25
TMEM35BQ8NCS4 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
TMEM35BQ8NCS4 AC084364.1-201ENST00000551967 1556 ntBASIC16.6■□□□□ 0.25
TMEM35BQ8NCS4 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 AL133267.1-201ENST00000398220 340 ntBASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 TOMM22P5-201ENST00000416399 439 ntBASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 PMS2P2-201ENST00000425039 1128 ntBASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 AC009477.1-201ENST00000452936 217 ntBASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 AC015910.1-201ENST00000579400 975 ntBASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 5S_rRNA.22-201ENST00000614916 106 ntBASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 BTBD7P1-201ENST00000447253 1453 ntBASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
TMEM35BQ8NCS4 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
TMEM35BQ8NCS4 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TMEM35BQ8NCS4 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 KRT8P44-201ENST00000441609 1350 ntBASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 AC126365.1-201ENST00000578585 1514 ntBASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM35BQ8NCS4 MZF1-201ENST00000215057 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 58.9 ms